| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_2033 |
|---|
| Symbol | |
|---|
| ID | 5375374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 2304946 |
|---|
| End bp | 2305716 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640843545 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001379220 |
|---|
| Protein GI | 153004895 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.00849421 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGG GACTGGGCGG AAAGGCGGCG ATCGTCACCG GGGGGAGCCG CGGGATCGGA
CGCGCCATCG CGCTCGAGCT CGCCCGCGAG GGCGCGCGGG TGGCGGTGGG CGCGCGCGGG
GAGGACGCGC TCGCGGAGAC GCTCCGCGCG CTCGAGGCCG CGGGTCCGGG CCCTCACCTC
GCCGTGCCCT GCGATCTGAC CACCGCGGGC GGGGTGGACG CCCTCGTCTC CGGGACGGTG
CAGCGGCTCG GCGGCGTCGA TCTGCTCGTG AACAACGTGG GCGGCTCGGG CGCGAGGACG
GTCGCCGAGG CCGACGAGGC GGACTTCCGC GCGGTGCTCG ATCGAAACCT CTTCCCCGCG
CTGCGCGCGA GCCTCCGGGT GATCCCGGAG CTTCGCCGCC GCGGCGGCGG CGCCATCGTG
ATGATCTCCT CGATCTGGGG CCGCGAGGCC GGGGGCGGCC CGTCCTACAA CGTCGCGAAG
GCGGCGGAGG TGAGCCTCGC GAAGGCGCTC GCGCGGGAGC TCGCGCGGGA AGGCATCCGC
GTGAACACCG TCGCGCCGGG ATCGATCGCG TTCCCCGGCG GCGGGTGGGA GCGGCGCCGG
CTCTCCGATC CGGAGGGCAT CGCCGACTTC GTCGGCCGTG AGATCCCCGG GGGGCGCTTC
GGCCGGCCGG AGGAGGTGGC GGCCGTCGTC GCCTTCCTCC TCTCGGCGCG GGCGAGCTGG
GTGAACGGCG CGTGCTGGGT GGTGGACGGC GGGCAGAGCC GCGCGTTTTG A
|
|---|
| Protein sequence | MDLGLGGKAA IVTGGSRGIG RAIALELARE GARVAVGARG EDALAETLRA LEAAGPGPHL
AVPCDLTTAG GVDALVSGTV QRLGGVDLLV NNVGGSGART VAEADEADFR AVLDRNLFPA
LRASLRVIPE LRRRGGGAIV MISSIWGREA GGGPSYNVAK AAEVSLAKAL ARELAREGIR
VNTVAPGSIA FPGGGWERRR LSDPEGIADF VGREIPGGRF GRPEEVAAVV AFLLSARASW
VNGACWVVDG GQSRAF
|
|---|
| |