| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5751 |
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| Symbol | |
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| ID | 6278790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1957269 |
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| End bp | 1958033 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616821 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001889464 |
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| Protein GI | 187920432 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0937136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGC AACTGAAGGG TTTGAAGGCG GTCGTGACCG GCGGCACCAA GGGCATTGGG
CTCGCCATTG CGCGGACGCT CGCAGCGGAA GGTGCCGAGG TCGCCATTTG CGCACGCGAT
CCGGCTGCCG TCGAGGCGAC CGTTAGCGCG CTCACCGAAC TGAGCGGCGC GCGCGCATCG
GGCGCGGCAG TGGATGTATC GGATGGCGCC GCGCTCAAAG CTTGGGTCGA GCGTATCGGC
TCGGAGTGGG GCGGCCTCGA CATAGTCGTG GCGAATGTAA GCGCGCTCGC GATCGGCAAC
GACATTGAAT CGTGGCGCAA GGAATTCGAA ACCGATCTGC TCGGCACCGT CCATCTCGTC
GATGCGGCGA TGCCGTATCT CGAAGCGAGC CGGGCCGCGT CGATCGTCGC GATATCGAGC
GTGTCGGGAC GCGAGATCGA TTTCGCGGCG GGTCCTTATG GCGTGTTCAA GGCCGCGATC
GTTCACTACA TACAGGGGCT CGCAAATCAG CTTGCGTCGA AGGGCATTCG CGCGAACACG
GTGTCGCCCG GGAATGTGTA TTTCGAGGGC GGCGTGTGGG ACTGGATCGA GCATAACGAT
GCGGCGCTAT TCGAACGCGC GCTCGCATTG AATCCGACTG GGCGCATGGG ACGCCCGCAG
GAAATCGCTA ACGCGGTGGC GTTCATCGCG AGTCCGGCGG CGAGTTTTGT GAGCGGAACA
AACTTCGTCG TCGATGGAGC ACTCACACGC GGCGTGCAGC TCTGA
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| Protein sequence | MDLQLKGLKA VVTGGTKGIG LAIARTLAAE GAEVAICARD PAAVEATVSA LTELSGARAS
GAAVDVSDGA ALKAWVERIG SEWGGLDIVV ANVSALAIGN DIESWRKEFE TDLLGTVHLV
DAAMPYLEAS RAASIVAISS VSGREIDFAA GPYGVFKAAI VHYIQGLANQ LASKGIRANT
VSPGNVYFEG GVWDWIEHND AALFERALAL NPTGRMGRPQ EIANAVAFIA SPAASFVSGT
NFVVDGALTR GVQL
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