| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4528 |
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| Symbol | |
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| ID | 3912345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5117385 |
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| End bp | 5118161 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637886432 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_488122 |
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| Protein GI | 86751626 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.831809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACA AACCCCTCAG CCGTTCCGTC GAAGGCCTGC GCGTGCTGAT CACGGGTGCT
GCGAGCGGCA TGGGCCGCGC CACCGCGCAT GTGTTCGCCG ACGAAGGCGC GCGCGTCGCC
GTCACCGACG TGACGCGCGA CGCCGCGCAG CCGGTGGCCG AGGCGATCCA AGCGCGCGGC
GGCGACGCGA CCGCGTTCGC GCTCGATGTC GGCGACGCCG CCGCGATCAA GGCCGGCGTC
GACGCGATCG CGCAGGCGCT CGGCGGGCTC GACATCGTCA TCAACAATGC CGGCATTTCA
GTGCGACTGC CGATCGACGA CGACGGCTAC GACGCCGGCT GGGACCGCGC GCTCGCGGTG
ATGCTGAGCG CACATCCGCG CGTGATCCGC GCCGCGCTGC CCTATCTGCG CAAGTCGTCT
TCGCCGCGGA TCGTCAACAT CGCCTCCACC GAAGCGCTCG GCGCCACCGC CGGCCACAGC
GCCTATTCGG CCGCGAAGGC CGGCGTCACC GGTCTCACGC GCTCGCTCGC GGTCGAGCTC
GGCCCCGAAG GCATCACCGT CAATTGCATC TGCCCGGGTC CGATCACCAC CGCGATGACC
GACCGCATCA GCGACGACCA CAAGCAGAAA TACGCCCGCC GCCGCACCGC GCTGCACCGC
TACGGCGCCC CGGAAGAAGT CGCCCACATG ACGCTGAGCC TGTGCCTCCC CGCCGCGTCG
TTCCTCACCG GCGTGGTGAT TCCGGTCGAC GGGGGATTGA TGGCGAGGAA TGCGTGA
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| Protein sequence | MSYKPLSRSV EGLRVLITGA ASGMGRATAH VFADEGARVA VTDVTRDAAQ PVAEAIQARG
GDATAFALDV GDAAAIKAGV DAIAQALGGL DIVINNAGIS VRLPIDDDGY DAGWDRALAV
MLSAHPRVIR AALPYLRKSS SPRIVNIAST EALGATAGHS AYSAAKAGVT GLTRSLAVEL
GPEGITVNCI CPGPITTAMT DRISDDHKQK YARRRTALHR YGAPEEVAHM TLSLCLPAAS
FLTGVVIPVD GGLMARNA
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