| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0273 |
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| Symbol | |
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| ID | 5456553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 293858 |
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| End bp | 294622 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875837 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001411553 |
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| Protein GI | 154250729 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGT TCGACCTGAG CGGAAAAGTG GCCATCGTCA CCGGCTCGAC CAAGGGCATC
GGCGAGGCCA TCGTCCATCG CATGGCCGAG CACGGCGCGA AGGTCGTGGT GTCGAGCCGC
AAGGCGGATG CCTGCGAAAA GGTGGCGGGC GAGATCAACG CCAAATATGC GGGCCAGGCC
ATCGCGGTCC CCTGCAACAT CTCGGAAAAG TCCGACCTGC AGCGCCTGGT CGACACGACG
ATGAAGGAAT GGGGACGCGT CGACAGCCTG GTCTGCAACG CGGCCGTGAA CCCCTATTTC
GGCCCCTCGA AGGACCTGCC CGATGACGCC TTCGACAAGA TCATGGGCGC CAATATCAAG
TCGAACCACT GGCTGGCGCA TATGGTGCTG CCGCAGATGG TCGAGCGGAA GGACGGCTCG
ATCACCATCG TCTCCTCCAT CGGCGGCCTG CGCGGTTCGC CGATCCTCGG CGCCTATTGC
GTCTCCAAGG CTGCCGACAT GCAGCTCGCG CGTAATCTCG CGGTCGAATA TGGCCCCTCG
AACATTCGCG TGAACTGCAT CGCGCCGGGC CTCATCAAGA CCTATTTCGC GAAGGCGCTG
TGGGACAATC CCGAAATTCT CGAACGTTCC ACCGCCGGCG CGCCGCTGAA GCGCATCGGC
ATGCCGGATG AAATCGCCGG CGCCGCCGTC TTCCTGGCGA GCCCGGCCGG TGCCTTCATG
ACCGGACAGA CCATGGTCAT CGATGGCGGC GCGACCGCCT CCTGA
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| Protein sequence | MTLFDLSGKV AIVTGSTKGI GEAIVHRMAE HGAKVVVSSR KADACEKVAG EINAKYAGQA
IAVPCNISEK SDLQRLVDTT MKEWGRVDSL VCNAAVNPYF GPSKDLPDDA FDKIMGANIK
SNHWLAHMVL PQMVERKDGS ITIVSSIGGL RGSPILGAYC VSKAADMQLA RNLAVEYGPS
NIRVNCIAPG LIKTYFAKAL WDNPEILERS TAGAPLKRIG MPDEIAGAAV FLASPAGAFM
TGQTMVIDGG ATAS
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