| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5059 |
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| Symbol | |
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| ID | 8547470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 6976722 |
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| End bp | 6977522 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646389735 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003269440 |
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| Protein GI | 262198231 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACTGT CCCGCTCCAT GTCTGAAACT GCTTCCAGCA CTATCTCGCT TCAGGGCGAC
GTCGTTGTGA TCACGGGCGC GAGCCGCGGC ATTGGCGCCG CTATCGCCCG CGCGTGCGTG
CAGGCGGGTG CCCGCGTCGT GCTCGCGTCG CGCAAGCAAC CGGATCTCGA CACCCTGGCC
GAAGAACTCC GCGCCGAAGG TGGCGAGGCG CTGCCGATCG CGTGTCACAT CGGCAAGCCC
GAGCAGATCA CGGCGCTGTT CGAGCGCGCG GCCAGCGAGT TCGGCAAGGT CGACGCGCTC
GTCAGCAACG CGGCCACCAA CCCGTATTTC GGACCGCTGA TCGACACGCC CGAGGCCGCC
ATCGACAAGA CCATCGAGGT CAACATGAAG GGATACCTCA GCGCCGCCAG CGCGTTCGTC
AAGCACGTGC GCGCGCGCAA GGGCGAGCGC GGCAGCATCG TCAATGTGGC CAGCGTGGTC
GGCATGCAGG CGGCGCCCAT GCAGGGCGTC TACGGCATGA CCAAGGCCGC CGTCATCTCG
ATGACCCAGA CCCTGGCGCT CGAGCTCGGC AGCACCGGCA TCCGCGTCAA CGCCATCGCC
CCGGGCCTGG TCGAGACCCG CTTCGCGGCC GCCATCGTCG ACAACCCGGA CATGCGCGAC
CACTTCGTCA AGCGCACGGC GCTGCGGCGC CACGCCCAGC CCGAGGAGAT CGCGGGCGCG
GCCGTGTACC TCAGCTCGCA GGCGGCGTCC TACGTCACCG GCCACACCAT GGTCGTGGAC
GGCGGCTTTA CCACCTGCTG A
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| Protein sequence | MILSRSMSET ASSTISLQGD VVVITGASRG IGAAIARACV QAGARVVLAS RKQPDLDTLA
EELRAEGGEA LPIACHIGKP EQITALFERA ASEFGKVDAL VSNAATNPYF GPLIDTPEAA
IDKTIEVNMK GYLSAASAFV KHVRARKGER GSIVNVASVV GMQAAPMQGV YGMTKAAVIS
MTQTLALELG STGIRVNAIA PGLVETRFAA AIVDNPDMRD HFVKRTALRR HAQPEEIAGA
AVYLSSQAAS YVTGHTMVVD GGFTTC
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