| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3121 |
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| Symbol | |
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| ID | 3910922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3555430 |
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| End bp | 3556233 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637885025 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_486730 |
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| Protein GI | 86750234 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.780645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTT CGCTGGACGG ACGAGTCGCT CTCGTCACCG GGGCGGGACG CGGCATCGGC
GCAGCCATCG CGAGCCGGCT CGCGGATGCT GGCGCGCTGG TGTATCTCGC CGACAAGGAT
CTCGCGCGTG CAGAAACTCA GACCGCCGAA ATCAGCGCAC GCGGCGGCAA AGCACGCTCC
GCAATGCTCG ATGTCTGCGA CGCCGATCGC TGGCAGGCCG TCGTCGCGGA CATCGAACGA
AGCACCGGCC GCCTCGACAT CCTCGTCAAC AATGCCGGTC TTGCGGTCTC CAAATCCGTC
GAAGACACCA CGGTCGACGA TTGGCGCATG CTGATGCGGA TCAACCTGGA AGGCCCGTTC
GTGGGGACCA AAGCGGTCCT GCCGCTGATG AAAACGACCG CGCTCCAGAC ACCGTTCGGC
GGCTCGATCG TCAATGTCAG TTCGATCTCC GGCATCGTCG GCACGGCGAA TCTGTCGTGC
TACGCAGCGA CCAAGGGCGG CCTTCGTTAC TTCAGCAAGA GCGCGGCGCT GGAATTCGCC
AGGGCCGGAT ATCGCATCCG CGTCAATACG ATTCATCCGG GACTGACCGA GGGCGCGTCC
TCGACCGTGC TGTTCGAGGG CAGCGTCGCA TCCGGCGCCT GCGCCGACCT CGAAGAAGCC
GAGCGGATGT GGACCAGCCG TTATCCGGTC AACCGCATGG CCCGCCCGAT CGACATCGCC
GGGGGCGTTC TGTTTCTGGC CAGCGACGAC TCGAATTTCA TGACCGGCAC CGAACTGATC
ATGGACGGCG GCCTGACTGC GTGA
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| Protein sequence | MDISLDGRVA LVTGAGRGIG AAIASRLADA GALVYLADKD LARAETQTAE ISARGGKARS
AMLDVCDADR WQAVVADIER STGRLDILVN NAGLAVSKSV EDTTVDDWRM LMRINLEGPF
VGTKAVLPLM KTTALQTPFG GSIVNVSSIS GIVGTANLSC YAATKGGLRY FSKSAALEFA
RAGYRIRVNT IHPGLTEGAS STVLFEGSVA SGACADLEEA ERMWTSRYPV NRMARPIDIA
GGVLFLASDD SNFMTGTELI MDGGLTA
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