| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1220 |
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| Symbol | |
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| ID | 4665118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1344838 |
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| End bp | 1345602 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639822413 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_969585 |
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| Protein GI | 120609907 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0140677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCCC TCGACCACCG AATCGCCATC GTCACGGGCG CCAGCTCGGG CATCGGCAGG
GCCGCCGCCC TGCTCTTCGC GCAGCAGGGC GCGCGCGTCG TGGCCGGAGC GCGGCGCCAG
GCGGAGCTGG ACCGGCTCGT GGCGGAGATC CGGGACGCCG GCGGACAGGC CACCGCGCTG
GCCGGCGACG TCCGCGATGC CGCCTACGCC GGGGCCCTGG TGCAGGAGGC GGTCGGGCGG
TTCGGCGGGC TGGACATCGC CTTCAACAAC GCCGGCACGC TCGGGCCCCT CGGCTCCACG
ACCGACATCC ATCCGGATGA CTGGCGCCAC ACGCTGGACA CCAATCTCGG CAGCGCATTC
CTCGGCGCGC GGCAGCAGAT CCCGGCCATG CGGGAACGCG GCGGCGGCTC CGTCATCTTC
ACCTCCACCT TCGTCGGCTA CACCGCCGGG TTCGCGGGCG TGGCGGCGTA CGCAGCCAGC
AAGTCCGGCC TCATCGGGCT GGCACAGGCC CTGGCGGCCG AATATGGCGC CGAAGGAATA
CGCGTCAATG CCCTGCTGCC CGGCGGCACC GACACCCCCA TGGCACGCGA GATGAACGGC
AGCCCCGAGG CCCTGGCCCA GGTAGCCCGG CTGCACGCCC TGCGGCGGCT GGCGCGCCCC
GAGGAAATCG CGCAGGCGGC GCTCTACCTG GCGTCGGACG CTTCGTCTTT CGTCACCGGC
ACCGCGATGC TGGTGGACGG GGGCATCTCG GTCCTGCGCG GCTGA
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| Protein sequence | MPSLDHRIAI VTGASSGIGR AAALLFAQQG ARVVAGARRQ AELDRLVAEI RDAGGQATAL
AGDVRDAAYA GALVQEAVGR FGGLDIAFNN AGTLGPLGST TDIHPDDWRH TLDTNLGSAF
LGARQQIPAM RERGGGSVIF TSTFVGYTAG FAGVAAYAAS KSGLIGLAQA LAAEYGAEGI
RVNALLPGGT DTPMAREMNG SPEALAQVAR LHALRRLARP EEIAQAALYL ASDASSFVTG
TAMLVDGGIS VLRG
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