Gene Mmcs_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2623 
Symbol 
ID4111456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2782423 
End bp2783277 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content66% 
IMG OID638031748 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_639787 
Protein GI108799590 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.795257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGTACA TCGGGCTGAA ATCGCTGTGC AGGAGGCCCG ACCAACGAGA AAGGCGACAC 
GTTATAAACA GCAAATTCGC TACGCAGGCA GAGCTTTTCG GGCTCAGTGG TAAACGAGCC
CTCGTCACCG GCGGCACCAG GGGAATCGGG ATGATGATCG CGCGCGGGCT CCTCCAGTCG
GGTGCCCGCG TGGTCATCAG CTCGCGCAAC GCAGAAGCGT GCGCTCACGC GCGGAAGGAG
CTGTCCGTAT ACGGCGACGT CTGGGCCGTG CCCGCCGATC TGTCCCGGCA CGACGAGTGT
GAGCGCCTCG CCGACCTTGT CACAGCCGAA TCCGGGAAGC TCGACATCCT CGTCAACAAT
GCGGGCGCAA TGTGGGACGA GCCGTTGGAG ACGTTCCCGG ACGAAGCCTG GAACACGGTC
ATCGACCTCA ACCTGAAGTC GCCGTTCTGG CTCGTGCAGG CGCTGCTGCC GGCGCTCCGC
AGCGCCGGTA CCGCCGACGA TCCTGCGCGG ATCATCAACA TCGGCAGCAT CGCTGCCATA
CACATCCCCG CGCGGCCCAA CTACTCGTAC TCCAGCAGCA AGGCTGCGCT GCATCAACTC
ACCAGAGTGC TCGCCAAGGA GCTTGGCCCG CAGCACATCA CGGTGAACGC GGTGGCGCCG
GGACCGTTCC CGTCGACGAT GATGGCGGCA ACCCTCGACG AGTTCGGCGA GGCGATCGCG
GCGTCGGCCC CGCTGCGCCG GATCGGCCGC GACGACGACA TGGCGGGTGT CGCCGTGTTC
CTTGCCAGCC GGGCAGGCGC TTACCTCACG GGCGCCATCG TCCCCGTCGA CGGAGGGATC
GCCACGACCG CGTGA
 
Protein sequence
MLYIGLKSLC RRPDQRERRH VINSKFATQA ELFGLSGKRA LVTGGTRGIG MMIARGLLQS 
GARVVISSRN AEACAHARKE LSVYGDVWAV PADLSRHDEC ERLADLVTAE SGKLDILVNN
AGAMWDEPLE TFPDEAWNTV IDLNLKSPFW LVQALLPALR SAGTADDPAR IINIGSIAAI
HIPARPNYSY SSSKAALHQL TRVLAKELGP QHITVNAVAP GPFPSTMMAA TLDEFGEAIA
ASAPLRRIGR DDDMAGVAVF LASRAGAYLT GAIVPVDGGI ATTA