Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0097 |
Symbol | |
ID | 4012297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 100735 |
End bp | 101523 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637939782 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_546961 |
Protein GI | 91786009 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCTG ATAATTCATC CATGTCGGTA GCCGTGATCA CAGGCGGTGC CCGCGGCATC GGCCTGGCGA TTGGCCAGTG GTTCCTGAAA CACGGTCATC GGGTCGCACT GCTCGACATC GACGGCGATA CGCTGGCCCA GACGGCCGCC AGGCTGAATG ACGATCACGT GCTTGCCGTC CACTGTGACG TGTCCGACCC GCAGCAGGTG CAAGCTGCCG TGGACAAGGT AAGGGCTGCC TTCGGCCGGA TTGACGCGTT GGTTAATAAC GCCGGTGTGG CGGTGTTCAA ACCCATTGCT GAAACTACCT TTGCGGAATG GCGCCACGTG ATGGCGACGA ATCTTGACGG TGCGTTTCTG TGTACCCAGG CCTGCGCACC GGTCATGCAA AAAACTGGCG GTGGCAGCGT TGTCAATATC GCGTCCATCT CCGGTCTGCG CGCCAGCACA CTGCGCGTTG CGTACGGCAC CAGCAAGGCC GCGCTCATAC ACCTTACCAA GCAGCAGGCC GTGGAGCTGG GCAATGTCGG CATCCGGGTG AACGCAATCG CTCCCGGCCC CGTAGAGACC GAGATGGCCA AGCTGGTTCA CAGCGTGGCC ATCCGCTCGG ACTACTACGA TGCAATCCCG CTGAACCGCT ATGGCACAAC CGAGGAGATC GCGTCGGTCG CCGGTTTCCT CTGCAGTGCT GCCGCGAGTT ATGTGAACGG CCAGGTCGTG GCCGCGGACG GCGGCTTCGA CGCTGCCGGC GTAGGTCTGC CCACGTTGCG CAAGCGGGCC GCAGCCTAG
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Protein sequence | MTSDNSSMSV AVITGGARGI GLAIGQWFLK HGHRVALLDI DGDTLAQTAA RLNDDHVLAV HCDVSDPQQV QAAVDKVRAA FGRIDALVNN AGVAVFKPIA ETTFAEWRHV MATNLDGAFL CTQACAPVMQ KTGGGSVVNI ASISGLRAST LRVAYGTSKA ALIHLTKQQA VELGNVGIRV NAIAPGPVET EMAKLVHSVA IRSDYYDAIP LNRYGTTEEI ASVAGFLCSA AASYVNGQVV AADGGFDAAG VGLPTLRKRA AA
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