Gene Ndas_2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2918 
Symbol 
ID9246770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3490309 
End bp3491064 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content73% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003680834 
Protein GI297561860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.154844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCC GGTTCGGCGG GCGGACCGCC ATCGTCACCG GCGCGAGCCG GGGCATCGGC 
CTGGCCGTCG CCCAGCGGCT CGTCGACGAG GGCGCGCGCG TGTGCGTCAC GGCGCGCAGG
CCCGAGCCCC TGGAGGAGGC CGTCAAGGCC CTGGGCGGAC CCGAGCACGC CATCGGCGTC
CCCGGCCGGG CCGACGATCC CGAGCACCAG GACGCGGCCG TGGCCGCCAC CCTGGAGGCC
TTCGGCAGCA TCGACATGTT CGTCAACAAC ACCGGCATCA ACCCGGTCTA CGGGCGGATG
ATCGACCTGA ACCTGGACGC GGCCCGCAAG ATCTTCGAGG TCAACGTGCT GTCCGCGATC
TCGTGGACGC AGAAGGCCTA CCACGCCTGG ATGGCCGAGC ACGGCGGCGC CGTCGTCAAC
GTCTCCTCCG TGGCCGGGAC CAGGCCCGCC CCCGGCATCG GCTTCTACGG CGCCACCAAG
GCGACGCTCA TCCACGTCAC CGAGGAGCTG GCCGTCGAAC TGGGCCCGGG GGTCCGCGTG
AACGGCGTCG CCCCGGCCGT GGTCAAGACC CGGTTCGCCG CCGCCCTCTA CGAGGGGCGC
GAGGAGGAGG TCGCCGCCCA GTACCCCCTG GGGCGCCTGG GCGAGCCCGA GGACGTGGCG
GGCGCGGTGG CCTTCCTGCT CTCCGACGAC GCCTCCTGGA TCACCGGCCG CACCCTCGTC
CTGGACGGCG GCCTCACCCT CACCGGAGGT GTGTGA
 
Protein sequence
MTSRFGGRTA IVTGASRGIG LAVAQRLVDE GARVCVTARR PEPLEEAVKA LGGPEHAIGV 
PGRADDPEHQ DAAVAATLEA FGSIDMFVNN TGINPVYGRM IDLNLDAARK IFEVNVLSAI
SWTQKAYHAW MAEHGGAVVN VSSVAGTRPA PGIGFYGATK ATLIHVTEEL AVELGPGVRV
NGVAPAVVKT RFAAALYEGR EEEVAAQYPL GRLGEPEDVA GAVAFLLSDD ASWITGRTLV
LDGGLTLTGG V