Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2913 |
Symbol | |
ID | 8884112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3065058 |
End bp | 3065801 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003511681 |
Protein GI | 291300403 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00331942 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00525068 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACGAA CGGCCATCAT CACCGGCGCG AGCCGGGGCA TCGGACTGGG CATCGCACAG GCCCTGGTGG ACCGCGGCGA CCGCGTCTGC GTCACCGCCC GCGACCCCGA AACCCTCGCC GAAGCCGTGG AAACGTTGGG CGGCCCCAAA TCCGCCATCG GCGTGGCGGG CAAAGCCCAC GACCCGGCAC ACCAGGACGA AGCGATCGCA CGCACCGTCG ACGCGTTCGG CGGCATCGAC CTGCTCGTCA ACAACACCGG CACCAACCCG GTCTTCGGCC CACTGCTCGA CCTCGACCTC GACGTCGCCC GCAAGATGGT CGACATCAAC CTGCTGACGG TGCTGGCCTG GACCAAGAAG GCACACGCCG CGTCCATGGG CGAACGCGGC GGCGCGATCG TCAACATCGC CTCGGTCGCC GGACTCAAAC CGGCCCCCGG CCTGGGCTTC TACGGCGTCA CCAAAGCCGC GATGATCCAG CTGACCGCAC AACTGGCGGT CGAACTGAGC CCCGGCATCC GCGTCAACGC GGTGGCACCG GCGGTGGTCA AGACGAAGTT CGCCGCCGCG CTGTACTCCG GCCGCGAGGA ACAGGCCGCC GCACCCTACC CACTGGAACG GCTCGGCGTC CCCGCCGACG TCGCCGGAGC CGCGGCCTTC CTGCTGTCCG AGGAAGCCAG CTGGATGACC GGCCAGACCC TCGTCGTGGA CGGCGGACTG ACCCTGATGG GCGGCCTGAC ATGA
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Protein sequence | MTRTAIITGA SRGIGLGIAQ ALVDRGDRVC VTARDPETLA EAVETLGGPK SAIGVAGKAH DPAHQDEAIA RTVDAFGGID LLVNNTGTNP VFGPLLDLDL DVARKMVDIN LLTVLAWTKK AHAASMGERG GAIVNIASVA GLKPAPGLGF YGVTKAAMIQ LTAQLAVELS PGIRVNAVAP AVVKTKFAAA LYSGREEQAA APYPLERLGV PADVAGAAAF LLSEEASWMT GQTLVVDGGL TLMGGLT
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