Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4554 |
Symbol | |
ID | 5672901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5433062 |
End bp | 5433718 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641243417 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001508833 |
Protein GI | 158316325 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCTTC ATCTGAACGG TAAGGCCGCA CTCGTCACCG GAGGCTCGCG CGGCATCGGG CACGCGATCG CCGCCCGCCT GTCGACCGAA GGCTGCCGGG TAGGGATCTG CGGACGCGAT CCCGACACGC TCGCGGAAGC GACAGCGGGC CTCGGACGCG CCGAGTCCGA CGTCGTCGGC GTCATCGCCG ACGTGACCAG ACCGGGCGAG GTCGAACGCT TCGTCGAAGC CGCCGCCGCG GCCCTCGGTG GCGTCGACCT GCTGGTCGCG AACGTCGGCG GCGGCGCGGT CGTCATCGTC TCGTCGATCT CCGCGTCGAA GCCGTCGCCA CGGGCGCAGT ACGGGGCGGC CAAAGCCGCG GAGAACTACC TGGCCTCGAC CTTCGCCCGA GAACTGGGCC CGCTCAACAT CCGCGTCAAC GCCGTGAGCC CGGGATCCGT CCTCTTCCCC GACGGCGGGT GGGAGCGGTA CTCCCGGCGC CACCCGAACG AGTTCGACGA GTTCGTCCAG CGAGACTTCC CCGCCCGCCG ACTGGGCACC GTCGACGAGG TCGCGGACGT GGTCACCTTC CTGCCCTCAG AGCGCGCCAG CTGGGTGAAC GGAGCCACCA TCGCCGTAGA CGGCGCTCAG GGCCGACCAA GCGCCAACGG GTACTGA
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Protein sequence | MDLHLNGKAA LVTGGSRGIG HAIAARLSTE GCRVGICGRD PDTLAEATAG LGRAESDVVG VIADVTRPGE VERFVEAAAA ALGGVDLLVA NVGGGAVVIV SSISASKPSP RAQYGAAKAA ENYLASTFAR ELGPLNIRVN AVSPGSVLFP DGGWERYSRR HPNEFDEFVQ RDFPARRLGT VDEVADVVTF LPSERASWVN GATIAVDGAQ GRPSANGY
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