| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3622 |
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| Symbol | |
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| ID | 8334975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4050096 |
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| End bp | 4050884 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644956763 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003114366 |
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| Protein GI | 256392802 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.154401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGC ACCTGACCGG CAAGACCGCG ATCGTCACCG GCGCCAGCCG CGGCATCGGA
CTGGCGGTCG CCCGCACCCT GGTCGCCGAG GGGGCGCGGG TGGTCGCCGG CGCCCGCGAG
ATCACCCCCG AGCTGAAGGC GCTCGCCGCC GACGGAGAGG TCCTGGCGGT CGATCTGGAT
CTGACCGCGC CGCAGGGTCC GGCCGAGCTG ATCGCGGCCG CCGTCCTCGC CTACGGCGGC
CTGGACATCC TGGTCAACAA CGTCGGGGCG GTCCGGCCGC GGACCGAGGG CTTCCTGGCC
GTGACCGACG AGGACTGGGC CGCGACGCTG GCCGTCAACT TCCTGGCCGC CGTCCGCACC
ACGCGGGCCG CACTCCCCTC CCTGATCGAG CGCGGCACGG CGGCCATCGT CACCGTCAGC
TCCGTCAACG CCTTCCTGCC CGACCCGCTC GTCATCGACT ACAGCGCCGC CAAGGCCGCG
CTGACCAACT TCTGCAAGTC GTTGTCCAAG CAGGTCGGTC CGCAGGGCGT CCGGGTCAAC
ACCGTCAGCC CCGGACCGGT GACCACCGGG CTGTGGCTGG CCGAGGAGGG CGTCGCGGCG
ACCGTCGCCC GGGCCACCGG CGGCACCGCC CAGGACATCG CCAAGCAAGC CGCCGGCGAC
GCCGTCACCG GCCGGTTCAC CCACCCCGAG GAGGTCGCGG ACCTCGTCGC CTTCTTGGCC
AGCGATCGCG CCGCCAACAT CACCGGGTCC GACATCGTCA TCGACGGCGG GCTGGTCAGC
ACCCTGTAA
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| Protein sequence | MDLHLTGKTA IVTGASRGIG LAVARTLVAE GARVVAGARE ITPELKALAA DGEVLAVDLD
LTAPQGPAEL IAAAVLAYGG LDILVNNVGA VRPRTEGFLA VTDEDWAATL AVNFLAAVRT
TRAALPSLIE RGTAAIVTVS SVNAFLPDPL VIDYSAAKAA LTNFCKSLSK QVGPQGVRVN
TVSPGPVTTG LWLAEEGVAA TVARATGGTA QDIAKQAAGD AVTGRFTHPE EVADLVAFLA
SDRAANITGS DIVIDGGLVS TL
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