| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_1822 |
|---|
| Symbol | |
|---|
| ID | 6137851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 1947715 |
|---|
| End bp | 1948485 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641627529 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001754500 |
|---|
| Protein GI | 170748240 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.675058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0165705 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGT TCGACCTGAC CGGCAAGGTC GCCCTCATCA CCGGCTCGTC CCGGGGCATC
GGGCGGGCGA TCGCCCTGCG GATGGCCGAG CACGGCGCCC GCGTGGTGAT CTCCTCGCGC
AAGCGCGAGG CCTGCGCGGC GGTGGTCGCC GAGATCGAGG CCGCGCACGG CGCCGGCCGG
GCGGTGGCGA TTCCGGCCAG CATCTCGGTG AAGGCCGAGC TGGAACACCT CGTCGCCGAG
ACCGAGAGCC GGCTCGGGCC GGTCGACGTT CTGGTCTGCA ACGCCGCCAG CAATCCCTAT
TACGGGCCGC TGGCCGGCAT CTCCGACGCG CAGTTCCGAA AGATCCTCGA GAACAACGTC
CTGTCGAACC ACTGGCTGAT CCAGATGGTC GCCCCCGGCA TGGTGGCGCG GCGGGACGGG
GCGATCGTCA TCGTCTCCTC GATCGGGGCG CTCAAGGGTT CGCCCGTGAT CGGCGCCTAC
AACGTCTCGA AGGCCGCCGA CCTCCAGCTC GCCCGCAACT ACGCGGTGGA GTACGGGCCC
GCCAACGTGC GGGTGAACTG CCTGTGCCCG GGCCTGATCC GCACCGATTT CGCCCGCGCC
CTGTGGGAGA ATCCCGACAT GCTGGCCGCC ACCACGGACG CCGCCCCCCT GCGCCGGATC
GGCGAGCCCG ACGAGATCGC CGGCGCCGCC GTGTTCCTGG CCTCGGCGGC CGGCCGGTTC
GTGACCGGCC AGGCGCTCGT GATCGACGGC GGCGTGACCA TCGCCCGATG A
|
|---|
| Protein sequence | MSLFDLTGKV ALITGSSRGI GRAIALRMAE HGARVVISSR KREACAAVVA EIEAAHGAGR
AVAIPASISV KAELEHLVAE TESRLGPVDV LVCNAASNPY YGPLAGISDA QFRKILENNV
LSNHWLIQMV APGMVARRDG AIVIVSSIGA LKGSPVIGAY NVSKAADLQL ARNYAVEYGP
ANVRVNCLCP GLIRTDFARA LWENPDMLAA TTDAAPLRRI GEPDEIAGAA VFLASAAGRF
VTGQALVIDG GVTIAR
|
|---|
| |