Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5197 |
Symbol | |
ID | 8547609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7151229 |
End bp | 7151984 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646389874 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003269578 |
Protein GI | 262198369 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAACA AGTTGCAAGG AAAAGTGGCG GTAGTAACGG GCTCGTCCAA GGGGATTGGC GCGGAGATCG CGAAGAAGCT GGCGGCCGAG GGTGCCTCGG TGGTGGTCAA CTACGGCTCC AGCGCGGACG CGGCCGCGCG TGTGGTCAGC GAGATCGAGT CCAAGGGCGG CAAGGCCCTC GGGGTGCAGG CTGACGTCTC GAAACCTGGC GATATCGCCA AACTCTTCGC CGAGACCAAG CGCGTATTCG GACGCCTCGA CGTATTGGTC AACAACGCCG GCGTCTACGG TCCGACGCCG CTGGGCGAGA TCACGCTCGA GGAGTTTCAG CGCCAGTTCG GGCTCAACGT ATTCGGCCTG ACGCTCGCCA CCCAGGAGGC GGTCAAGTAC TTCGACGAGG CCGGCGGCAG CGTCATCAAC ATCGGCTCCG CCGTGAGCCG GGCAGCGTTC CCGGGCATGG GCGTGTACAC CGCCACCAAG GGCGCCGTGG ATGCGCTCAC GCGCACCTTC GCGGCCGAGC TCGGCCCCAA GCAGATCCGG GTCAACACGG TCAGCCCCGG CATGGTGCTC ACCGAGGGCA ACGCCGATAT GGCCGCGCCC GGCAGCCCCT TGCGCACCAT GATCGAGGCG CAGACGCCGC TCGGCCGCAT CGGCCAGGTG GACGATATCG CCCCGGCGGT GGCGTTCCTG GCCTCCGACG ACTCCGCCTG GATCACGGGC GAGCTGTTCT TCATCAGCGG CGGCATGCGC GGCTAG
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Protein sequence | MSNKLQGKVA VVTGSSKGIG AEIAKKLAAE GASVVVNYGS SADAAARVVS EIESKGGKAL GVQADVSKPG DIAKLFAETK RVFGRLDVLV NNAGVYGPTP LGEITLEEFQ RQFGLNVFGL TLATQEAVKY FDEAGGSVIN IGSAVSRAAF PGMGVYTATK GAVDALTRTF AAELGPKQIR VNTVSPGMVL TEGNADMAAP GSPLRTMIEA QTPLGRIGQV DDIAPAVAFL ASDDSAWITG ELFFISGGMR G
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