| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0483 |
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| Symbol | |
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| ID | 5456244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 523586 |
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| End bp | 524374 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876049 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001411763 |
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| Protein GI | 154250939 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG AACTCGAAGG CAAGCATGTC TTCATCGCCG GCGCGAGCCG CGGCATCGGC
CTCGGCATGG CGCGTGCCTT CGTGGCGGAA GGCGCGAAAG TCGCGTTGAC GGCGCGCGGC
GCCGGTCCGC TCGACGAGGC GAAACAGGCC CTCGTCGCCG AAGGCGCGAA AGCGGAAAAC
CTCCTCACCA TCGCGGGCGA CATGACGGCC AGCACCGACA TCGCCGCCGC GCTCGATGCG
GCGGAGGCGA AGCTCGGCCC CGTCCACTGC GCCATCGCCA ATGTCGGCCT CTCCCGCGCG
CCGCTCGGCT TCGATGTGTC GGACGAGGAT TGGGATGCCG ACATGAAGCA GAACCTTTTC
GGCTCGGTCT GGCTCGCCCG CGAAGCGATC CGCCGCATCC TGAAGCGCCC CGCGCCGGAG
CGTGAGGGCG CAAATGTGAT CCTGATTTCC TCGGTCGCCG GCGTCGATGC CATGGGCACC
TCGCTCACCT ATGCGGCGTC GAAGGCAGGC ATCAACCACT TCACGCGCCA GCTCGCGAAG
TTCACCGGCA AGGAAGCGAT CCGCGTCAAT GCCATCGCGC CGGGCAACAT CCTCTTTGAA
GACGGCGTCT GGGACAAGAA CACGAAGGAG CGCCCGGAAG CCTGGGAACG CTGGATCAAG
CGCGAAGTGG CGCTGCGCCG CTTCGGCACC GTCGAGGAAA TAGCCGACGC CGCCCTCTTC
CTCGCAAGCC CCCGCGCAAG CTTCATCACC GGCGAAGTCA TGGTGGTGGA CGGCGGCCAG
GTGCGGTAA
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| Protein sequence | MKLELEGKHV FIAGASRGIG LGMARAFVAE GAKVALTARG AGPLDEAKQA LVAEGAKAEN
LLTIAGDMTA STDIAAALDA AEAKLGPVHC AIANVGLSRA PLGFDVSDED WDADMKQNLF
GSVWLAREAI RRILKRPAPE REGANVILIS SVAGVDAMGT SLTYAASKAG INHFTRQLAK
FTGKEAIRVN AIAPGNILFE DGVWDKNTKE RPEAWERWIK REVALRRFGT VEEIADAALF
LASPRASFIT GEVMVVDGGQ VR
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