More than 300 homologs were found in PanDaTox collection
for query gene TM1040_2647 on replicon NC_008044
Organism: Ruegeria sp. TM1040



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008044  TM1040_2647  methyl-accepting chemotaxis sensory transducer  100 
 
 
498 aa  1021    Ruegeria sp. TM1040  Bacteria  normal  0.835336  normal 
 
 
-
 
NC_008044  TM1040_1977  methyl-accepting chemotaxis sensory transducer  36.47 
 
 
485 aa  251  3e-65  Ruegeria sp. TM1040  Bacteria  normal  0.911865  normal  0.282235 
 
 
-
 
NC_007794  Saro_1430  methyl-accepting chemotaxis sensory transducer  32.02 
 
 
481 aa  240  4e-62  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.105361  n/a   
 
 
-
 
NC_010338  Caul_2435  methyl-accepting chemotaxis sensory transducer  34.35 
 
 
507 aa  233  6e-60  Caulobacter sp. K31  Bacteria  normal  0.264745  normal  0.414024 
 
 
-
 
NC_009484  Acry_2387  methyl-accepting chemotaxis sensory transducer  31.3 
 
 
505 aa  233  8.000000000000001e-60  Acidiphilium cryptum JF-5  Bacteria  normal  0.0566767  n/a   
 
 
-
 
NC_011365  Gdia_0173  methyl-accepting chemotaxis sensory transducer  32.17 
 
 
545 aa  231  2e-59  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.074609 
 
 
-
 
NC_010581  Bind_0080  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
510 aa  217  2.9999999999999998e-55  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_1550  methyl-accepting chemotaxis sensory transducer  31.19 
 
 
531 aa  202  9e-51  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.483034  normal  0.19588 
 
 
-
 
NC_012850  Rleg_0071  methyl-accepting chemotaxis sensory transducer  31.64 
 
 
494 aa  202  9.999999999999999e-51  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3360  methyl-accepting chemotaxis sensory transducer  39.01 
 
 
648 aa  194  3e-48  Jannaschia sp. CCS1  Bacteria  normal  0.59059  normal 
 
 
-
 
NC_011989  Avi_1439  methyl-accepting chemotaxis protein  32.64 
 
 
504 aa  194  3e-48  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5151  methyl-accepting chemotaxis protein  38.16 
 
 
776 aa  192  1e-47  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1798  methyl-accepting chemotaxis sensory transducer  38.13 
 
 
615 aa  191  2e-47  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.371991  normal 
 
 
-
 
NC_011368  Rleg2_5523  methyl-accepting chemotaxis sensory transducer  38.12 
 
 
616 aa  190  5.999999999999999e-47  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00344787 
 
 
-
 
NC_011984  Avi_9076  methyl-accepting chemotaxis protein  36.39 
 
 
612 aa  189  1e-46  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_2928  methyl-accepting chemotaxis protein  37.82 
 
 
792 aa  188  2e-46  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1697  methyl-accepting chemotaxis sensory transducer  36.2 
 
 
591 aa  187  4e-46  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0581  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.98 
 
 
607 aa  187  4e-46  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.893675 
 
 
-
 
NC_010581  Bind_3620  methyl-accepting chemotaxis sensory transducer  37.58 
 
 
677 aa  187  5e-46  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0125911 
 
 
-
 
NC_008044  TM1040_0839  methyl-accepting chemotaxis sensory transducer  40.13 
 
 
927 aa  186  9e-46  Ruegeria sp. TM1040  Bacteria  normal  0.587759  normal  0.752939 
 
 
-
 
NC_009484  Acry_1288  methyl-accepting chemotaxis sensory transducer  35.89 
 
 
591 aa  186  1.0000000000000001e-45  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0359  methyl-accepting chemotaxis sensory transducer  40.13 
 
 
927 aa  186  1.0000000000000001e-45  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0606  methyl-accepting chemotaxis sensory transducer  37.38 
 
 
644 aa  186  1.0000000000000001e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.307243 
 
 
-
 
NC_009636  Smed_2051  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
717 aa  185  1.0000000000000001e-45  Sinorhizobium medicae WSM419  Bacteria  normal  0.245091  normal  0.347836 
 
 
-
 
NC_012850  Rleg_0580  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.9 
 
 
606 aa  184  2.0000000000000003e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.237889  normal 
 
 
-
 
NC_008043  TM1040_3177  methyl-accepting chemotaxis sensory transducer  39.02 
 
 
749 aa  185  2.0000000000000003e-45  Ruegeria sp. TM1040  Bacteria  normal  0.726311  normal 
 
 
-
 
NC_011369  Rleg2_0563  methyl-accepting chemotaxis sensory transducer  37.42 
 
 
645 aa  185  2.0000000000000003e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.73856 
 
 
-
 
NC_011368  Rleg2_5354  methyl-accepting chemotaxis sensory transducer  37.35 
 
 
714 aa  184  4.0000000000000006e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.642158  normal  0.0994281 
 
 
-
 
NC_011989  Avi_0958  methyl-accepting chemotaxis protein  38.78 
 
 
610 aa  184  4.0000000000000006e-45  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0537  methyl-accepting chemotaxis sensory transducer  38.36 
 
 
605 aa  183  6e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.180661 
 
 
-
 
NC_011989  Avi_1117  methyl-accepting chemotaxis protein  37.25 
 
 
657 aa  183  6e-45  Agrobacterium vitis S4  Bacteria  normal  0.593573  n/a   
 
 
-
 
NC_008043  TM1040_3209  methyl-accepting chemotaxis sensory transducer  35.98 
 
 
782 aa  182  1e-44  Ruegeria sp. TM1040  Bacteria  normal  0.684679  normal 
 
 
-
 
NC_010335  Caul_5142  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
599 aa  181  2e-44  Caulobacter sp. K31  Bacteria  normal  0.367406  normal  0.838811 
 
 
-
 
NC_012848  Rleg_5069  methyl-accepting chemotaxis sensory transducer  37.94 
 
 
714 aa  181  2.9999999999999997e-44  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.277036  normal 
 
 
-
 
NC_011989  Avi_2608  methyl-accepting chemotaxis protein  36.77 
 
 
655 aa  180  4e-44  Agrobacterium vitis S4  Bacteria  normal  0.445883  n/a   
 
 
-
 
NC_011989  Avi_3729  methyl-accepting chemotaxis protein  36.63 
 
 
644 aa  180  5.999999999999999e-44  Agrobacterium vitis S4  Bacteria  normal  0.554142  n/a   
 
 
-
 
NC_009636  Smed_0051  methyl-accepting chemotaxis sensory transducer  37.16 
 
 
796 aa  180  5.999999999999999e-44  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.000000874578 
 
 
-
 
NC_011989  Avi_3714  methyl-accepting chemotaxis protein  37.66 
 
 
679 aa  179  9e-44  Agrobacterium vitis S4  Bacteria  normal  0.0885803  n/a   
 
 
-
 
NC_011989  Avi_3647  methyl-accepting chemotaxis protein  39.04 
 
 
680 aa  179  1e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1355  methyl-accepting chemotaxis sensory transducer  36.42 
 
 
494 aa  178  2e-43  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  36.63 
 
 
695 aa  177  3e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_2791  methyl-accepting chemotaxis protein  35.87 
 
 
622 aa  178  3e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2464  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.21 
 
 
605 aa  177  4e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2181  methyl-accepting chemotaxis sensory transducer  37.62 
 
 
606 aa  177  5e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.440189  normal  0.953277 
 
 
-
 
NC_011989  Avi_4013  methyl-accepting chemotaxis protein  36.36 
 
 
756 aa  177  5e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1383  methyl-accepting chemotaxis sensory transducer  40 
 
 
705 aa  176  7e-43  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3214  methyl-accepting chemotaxis sensory transducer  39.75 
 
 
532 aa  176  8e-43  Caulobacter sp. K31  Bacteria  normal  normal  0.409706 
 
 
-
 
NC_009636  Smed_0489  methyl-accepting chemotaxis sensory transducer  35.6 
 
 
698 aa  176  9e-43  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.000832175  normal 
 
 
-
 
NC_011989  Avi_1547  methyl-accepting chemotaxis protein  37.02 
 
 
635 aa  176  9.999999999999999e-43  Agrobacterium vitis S4  Bacteria  normal  0.0672502  n/a   
 
 
-
 
NC_011989  Avi_0793  methyl-accepting chemotaxis protein  36.18 
 
 
740 aa  176  9.999999999999999e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3923  methyl-accepting chemotaxis protein  36.18 
 
 
843 aa  175  9.999999999999999e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1141  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.54 
 
 
501 aa  175  1.9999999999999998e-42  Caulobacter sp. K31  Bacteria  normal  0.489477  hitchhiker  0.000166409 
 
 
-
 
NC_012850  Rleg_0401  methyl-accepting chemotaxis sensory transducer  36.33 
 
 
615 aa  175  1.9999999999999998e-42  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.000192098 
 
 
-
 
NC_009484  Acry_2705  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
509 aa  174  2.9999999999999996e-42  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0369  methyl-accepting chemotaxis sensory transducer  36 
 
 
615 aa  174  2.9999999999999996e-42  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00881781 
 
 
-
 
NC_009636  Smed_1613  methyl-accepting chemotaxis sensory transducer  38.41 
 
 
603 aa  174  2.9999999999999996e-42  Sinorhizobium medicae WSM419  Bacteria  normal  0.183078  normal  0.160096 
 
 
-
 
NC_011989  Avi_2860  methyl-accepting chemotaxis protein  37.7 
 
 
668 aa  173  5e-42  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0626  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.22 
 
 
726 aa  173  5.999999999999999e-42  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2002  methyl-accepting chemotaxis sensory transducer  35.2 
 
 
530 aa  173  7.999999999999999e-42  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0452  methyl-accepting chemotaxis protein  36.48 
 
 
622 aa  172  9e-42  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0305  methyl-accepting chemotaxis sensory transducer  36.33 
 
 
841 aa  172  1e-41  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011370  Rleg2_6126  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
650 aa  172  1e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.375381  normal  0.0878449 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  34.08 
 
 
767 aa  172  1e-41  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0214  methyl-accepting chemotaxis sensory transducer  34.87 
 
 
663 aa  172  1e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.287216 
 
 
-
 
NC_011369  Rleg2_0185  methyl-accepting chemotaxis sensory transducer  35.2 
 
 
669 aa  172  2e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2453  methyl-accepting chemotaxis sensory transducer  37.94 
 
 
788 aa  172  2e-41  Ruegeria sp. TM1040  Bacteria  normal  0.925334  normal  0.122382 
 
 
-
 
NC_009636  Smed_2893  methyl-accepting chemotaxis sensory transducer  35.39 
 
 
589 aa  172  2e-41  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_2600  methyl-accepting chemotaxis protein  36.69 
 
 
633 aa  171  2e-41  Agrobacterium vitis S4  Bacteria  normal  0.390364  n/a   
 
 
-
 
NC_010338  Caul_2177  methyl-accepting chemotaxis sensory transducer  35.69 
 
 
602 aa  171  2e-41  Caulobacter sp. K31  Bacteria  normal  0.180362  normal  0.483778 
 
 
-
 
NC_011989  Avi_0980  methyl-accepting chemotaxis protein  37.12 
 
 
611 aa  171  3e-41  Agrobacterium vitis S4  Bacteria  normal  0.442512  n/a   
 
 
-
 
NC_011989  Avi_1208  methyl-accepting chemotaxis protein  36.42 
 
 
604 aa  171  3e-41  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_2927  methyl-accepting chemotaxis protein  35.9 
 
 
730 aa  171  3e-41  Agrobacterium vitis S4  Bacteria  normal  0.0257741  n/a   
 
 
-
 
NC_012850  Rleg_0400  methyl-accepting chemotaxis sensory transducer  33.77 
 
 
843 aa  171  3e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.00170819 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  35.86 
 
 
860 aa  171  3e-41  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_009484  Acry_0681  methyl-accepting chemotaxis sensory transducer  35.12 
 
 
481 aa  171  3e-41  Acidiphilium cryptum JF-5  Bacteria  normal  0.123667  n/a   
 
 
-
 
NC_011989  Avi_4091  methyl-accepting chemotaxis protein  35.86 
 
 
592 aa  171  3e-41  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_2775  methyl-accepting chemotaxis protein  36.01 
 
 
558 aa  171  4e-41  Agrobacterium vitis S4  Bacteria  normal  0.536477  n/a   
 
 
-
 
NC_011369  Rleg2_0368  methyl-accepting chemotaxis sensory transducer  33.77 
 
 
843 aa  170  5e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0662296 
 
 
-
 
NC_011666  Msil_1449  methyl-accepting chemotaxis sensory transducer  35.43 
 
 
647 aa  170  5e-41  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010338  Caul_0236  methyl-accepting chemotaxis sensory transducer  36.69 
 
 
660 aa  170  5e-41  Caulobacter sp. K31  Bacteria  normal  0.105118  normal 
 
 
-
 
NC_012850  Rleg_3005  methyl-accepting chemotaxis sensory transducer  37.97 
 
 
665 aa  170  5e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0984  methyl-accepting chemotaxis sensory transducer  36.63 
 
 
608 aa  170  5e-41  Ruegeria sp. TM1040  Bacteria  normal  0.0666136  normal  0.983928 
 
 
-
 
NC_011989  Avi_0994  methyl-accepting chemotaxis protein  35.88 
 
 
649 aa  170  5e-41  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4811  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
625 aa  169  9e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.327513  normal 
 
 
-
 
NC_010338  Caul_0222  methyl-accepting chemotaxis sensory transducer  34.84 
 
 
642 aa  169  9e-41  Caulobacter sp. K31  Bacteria  normal  0.414219  normal  0.376796 
 
 
-
 
NC_012850  Rleg_0943  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.48 
 
 
793 aa  169  9e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.27721  normal 
 
 
-
 
NC_009636  Smed_0082  methyl-accepting chemotaxis sensory transducer  38.33 
 
 
665 aa  169  1e-40  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0221  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.44 
 
 
785 aa  169  1e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4524  methyl-accepting chemotaxis sensory transducer  35.5 
 
 
661 aa  169  1e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.66296 
 
 
-
 
NC_011369  Rleg2_3632  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.64 
 
 
592 aa  169  1e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.377399 
 
 
-
 
NC_010338  Caul_0276  methyl-accepting chemotaxis sensory transducer  35.12 
 
 
657 aa  169  1e-40  Caulobacter sp. K31  Bacteria  normal  0.461968  normal  0.560518 
 
 
-
 
NC_012854  Rleg_6402  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
688 aa  169  1e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.579482  normal  0.320846 
 
 
-
 
NC_011984  Avi_9088  methyl-accepting chemotaxis protein  36.66 
 
 
761 aa  169  1e-40  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3921  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.16 
 
 
586 aa  168  2e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0052  methyl-accepting chemotaxis sensory transducer  34.78 
 
 
778 aa  168  2e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0947231 
 
 
-
 
NC_012848  Rleg_4670  methyl-accepting chemotaxis sensory transducer  34.67 
 
 
625 aa  168  2e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.817515 
 
 
-
 
NC_011988  Avi_5554  methyl-accepting chemotaxis protein  38.43 
 
 
653 aa  167  2.9999999999999998e-40  Agrobacterium vitis S4  Bacteria  normal  0.0672502  n/a   
 
 
-
 
NC_009436  Ent638_2139  methyl-accepting chemotaxis sensory transducer  36.7 
 
 
512 aa  167  2.9999999999999998e-40  Enterobacter sp. 638  Bacteria  normal  0.619697  normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.33 
 
 
1123 aa  167  4e-40  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1083  methyl-accepting chemotaxis sensory transducer  36.45 
 
 
590 aa  167  4e-40  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>