More than 300 homologs were found in PanDaTox collection
for query gene Swoo_0831 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010506  Swoo_0831  response regulator receiver protein  100 
 
 		 122 aa  243  9e-64  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_3764  response regulator receiver protein  70.25 
 
 		 121 aa  182  2.0000000000000003e-45  Shewanella sediminis HAW-EB3  Bacteria  normal  0.105051  normal  1 
 
 
-
 
NC_009092  Shew_0703  response regulator receiver protein  66.67 
 
 		 120 aa  169  2e-41  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_2377  response regulator receiver protein  56.88 
 
 		 120 aa  132  1.9999999999999998e-30  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_3702  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  45.83 
 
 		 863 aa  105  3e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.170309 
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  38.02 
 
 		 383 aa  100  5e-21  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  38.02 
 
 		 383 aa  100  5e-21  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  42.5 
 
 		 338 aa  99.8  1e-20  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_0828  response regulator receiver modulated diguanylate cyclase  47.41 
 
 		 324 aa  99.4  1e-20  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  42.5 
 
 		 338 aa  99.8  1e-20  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  42.5 
 
 		 338 aa  99.8  1e-20  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012880  Dd703_3123  response regulator receiver modulated diguanylate cyclase  42.11 
 
 		 312 aa  99.4  1e-20  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  42.5 
 
 		 338 aa  99.8  1e-20  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  42.86 
 
 		 349 aa  99  2e-20  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_2262  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  44.17 
 
 		 853 aa  98.6  3e-20  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_3544  response regulator receiver modulated diguanylate cyclase  37.93 
 
 		 322 aa  97.8  4e-20  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0106122 
 
 
-
 
NC_008576  Mmc1_2393  response regulator receiver sensor hybrid histidine kinase  37.5 
 
 		 518 aa  97.8  4e-20  Magnetococcus sp. MC-1  Bacteria  normal  0.991201  normal  0.0787545 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 		 339 aa  96.3  1e-19  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008609  Ppro_2062  response regulator receiver protein  40 
 
 		 217 aa  95.9  2e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  41.67 
 
 		 365 aa  94.4  4e-19  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  40.83 
 
 		 338 aa  94.4  4e-19  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 		 339 aa  94.4  5e-19  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_1988  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  44.07 
 
 		 435 aa  94.4  5e-19  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  40.83 
 
 		 338 aa  94  6e-19  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  40.83 
 
 		 338 aa  94  6e-19  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  40.83 
 
 		 338 aa  94  6e-19  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_0860  response regulator  40.83 
 
 		 339 aa  93.6  8e-19  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013173  Dbac_2855  response regulator receiver sensor signal transduction histidine kinase  40.87 
 
 		 348 aa  93.6  8e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_007955  Mbur_0878  response regulator receiver  37.5 
 
 		 302 aa  93.6  8e-19  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  41.67 
 
 		 391 aa  93.2  1e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_007948  Bpro_4465  adenylate/guanylate cyclase  36.07 
 
 		 561 aa  92.8  1e-18  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.419976 
 
 
-
 
NC_008228  Patl_2089  diguanylate cyclase  37.5 
 
 		 306 aa  93.2  1e-18  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  46.67 
 
 		 383 aa  92.8  1e-18  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_008577  Shewana3_4015  response regulator receiver modulated diguanylate cyclase  36.52 
 
 		 315 aa  93.2  1e-18  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  38.33 
 
 		 340 aa  92.4  2e-18  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.129077 
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  38.02 
 
 		 308 aa  92.4  2e-18  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007955  Mbur_1775  PAS/PAC sensor hybrid histidine kinase  39.67 
 
 		 510 aa  91.3  5e-18  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  36.13 
 
 		 322 aa  90.5  7e-18  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_011059  Paes_1429  response regulator receiver protein  38.02 
 
 		 122 aa  90.5  7e-18  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.275463 
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  39.5 
 
 		 347 aa  90.1  9e-18  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  37.07 
 
 		 319 aa  89.7  1e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_4204  response regulator receiver modulated diguanylate cyclase  36.21 
 
 		 310 aa  89  2e-17  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_25160  response regulator  38.4 
 
 		 356 aa  89  2e-17  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_4132  response regulator receiver modulated diguanylate cyclase  36.21 
 
 		 310 aa  89  2e-17  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1463  response regulator receiver modulated metal dependent phosphohydrolase  39.17 
 
 		 364 aa  89  2e-17  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.404054 
 
 
-
 
NC_008577  Shewana3_0481  response regulator receiver protein  40.18 
 
 		 523 aa  89  2e-17  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  40.17 
 
 		 384 aa  88.2  3e-17  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal  1 
 
 
-
 
NC_009092  Shew_3790  response regulator receiver modulated diguanylate cyclase  36.67 
 
 		 300 aa  88.6  3e-17  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_0205  response regulator receiver protein  41.74 
 
 		 395 aa  88.6  3e-17  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002978  WD0221  response regulator PleD  40 
 
 		 460 aa  88.2  4e-17  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_4336  response regulator receiver modulated diguanylate cyclase  35.34 
 
 		 310 aa  87.8  4e-17  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  40 
 
 		 358 aa  87.4  5e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  36.36 
 
 		 379 aa  87.4  6e-17  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  34.78 
 
 		 377 aa  87.4  6e-17  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  38.02 
 
 		 170 aa  87.4  6e-17  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_007955  Mbur_2185  response regulator receiver  37.7 
 
 		 356 aa  87.4  6e-17  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2397  response regulator receiver modulated diguanylate cyclase  38.33 
 
 		 434 aa  87  7e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.593336  n/a   
 
 
-
 
NC_010524  Lcho_2589  response regulator receiver modulated metal dependent phosphohydrolase  40.98 
 
 		 375 aa  87  7e-17  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322399 
 
 
-
 
NC_011145  AnaeK_2309  response regulator receiver modulated diguanylate cyclase  38.33 
 
 		 434 aa  87  7e-17  Anaeromyxobacter sp. K  Bacteria  normal  0.484645  n/a   
 
 
-
 
NC_007519  Dde_1942  metal dependent phosphohydrolase  39.02 
 
 		 363 aa  87  8e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.284574  n/a   
 
 
-
 
NC_008340  Mlg_0356  response regulator receiver protein  39.83 
 
 		 121 aa  87  8e-17  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0780111  normal  0.957515 
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  38.94 
 
 		 308 aa  86.7  9e-17  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  39.5 
 
 		 333 aa  86.7  9e-17  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  37.61 
 
 		 310 aa  86.7  9e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  37.07 
 
 		 359 aa  86.3  1e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_007955  Mbur_2108  multisensor signal transduction histidine kinase  38.46 
 
 		 492 aa  86.7  1e-16  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0360  response regulator receiver protein  37.19 
 
 		 204 aa  86.3  1e-16  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000726536 
 
 
-
 
NC_010002  Daci_1507  response regulator receiver modulated diguanylate cyclase  37.4 
 
 		 308 aa  86.7  1e-16  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.914031 
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  36.97 
 
 		 225 aa  86.3  1e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_011146  Gbem_0378  response regulator receiver protein  36.36 
 
 		 204 aa  85.9  2e-16  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0804  two component LuxR family transcriptional regulator  37.4 
 
 		 204 aa  85.5  2e-16  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013385  Adeg_1897  two component transcriptional regulator, winged helix family  37.4 
 
 		 229 aa  85.5  2e-16  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007577  PMT9312_1712  two component transcriptional regulator  33.33 
 
 		 248 aa  85.9  2e-16  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
-
 
NC_011989  Avi_1750  response regulator PleD  41.67 
 
 		 457 aa  85.9  2e-16  Agrobacterium vitis S4  Bacteria  normal  0.263569  n/a   
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  38.05 
 
 		 377 aa  85.5  2e-16  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  37.29 
 
 		 331 aa  85.5  2e-16  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_0836  response regulator receiver protein  40.17 
 
 		 395 aa  85.5  2e-16  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_2833  response regulator receiver modulated metal dependent phosphohydrolase  38.46 
 
 		 360 aa  85.9  2e-16  Thauera sp. MZ1T  Bacteria  normal  0.809465  n/a   
 
 
-
 
NC_008340  Mlg_2429  response regulator receiver modulated metal dependent phosphohydrolase  39.83 
 
 		 480 aa  85.9  2e-16  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.129673 
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  40.83 
 
 		 353 aa  85.5  2e-16  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_013889  TK90_2399  response regulator receiver protein  39.05 
 
 		 121 aa  85.1  3e-16  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  0.732485 
 
 
-
 
NC_009091  P9301_18111  two-component response regulator  32.52 
 
 		 248 aa  84.3  4e-16  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_1098  PAS:GGDEF  41.18 
 
 		 705 aa  84.7  4e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_3005  response regulator receiver  40.17 
 
 		 361 aa  84.3  4e-16  Dechloromonas aromatica RCB  Bacteria  normal  0.931132  normal  1 
 
 
-
 
NC_007604  Synpcc7942_1221  response regulator receiver domain-containing protein  44.86 
 
 		 125 aa  84.7  4e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007912  Sde_3633  response regulator receiver domain-containing protein  38.1 
 
 		 120 aa  84.7  4e-16  Saccharophagus degradans 2-40  Bacteria  normal  0.480345  normal  1 
 
 
-
 
NC_008009  Acid345_2946  response regulator receiver modulated serine phosphatase  37.07 
 
 		 384 aa  84.7  4e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  37.82 
 
 		 365 aa  84.7  4e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0748941 
 
 
-
 
NC_008345  Sfri_2812  diguanylate cyclase  36.52 
 
 		 315 aa  84.7  4e-16  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  32.5 
 
 		 337 aa  84.7  4e-16  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_009636  Smed_0926  response regulator PleD  40.34 
 
 		 455 aa  84.3  5e-16  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.773886 
 
 
-
 
NC_010002  Daci_1192  response regulator receiver modulated diguanylate cyclase  37.61 
 
 		 316 aa  84.3  5e-16  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  37.19 
 
 		 228 aa  84.3  5e-16  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  37.07 
 
 		 383 aa  84.3  5e-16  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_011662  Tmz1t_0227  two component transcriptional regulator PhoB, winged helix family  36.67 
 
 		 236 aa  84.3  5e-16  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  36.21 
 
 		 367 aa  84.3  5e-16  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_004578  PSPTO_1278  sensory box protein/response regulator  40.34 
 
 		 705 aa  83.6  7e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.517683  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  34.78 
 
 		 328 aa  84  7e-16  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  38.26 
 
 		 328 aa  83.6  7e-16  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.0637882 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  38.26 
 
 		 331 aa  84  7e-16  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
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