Gene Mmc1_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2393 
Symbol 
ID4481944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3042617 
End bp3044173 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content54% 
IMG OID639723141 
Productresponse regulator receiver sensor hybrid histidine kinase 
Protein accessionYP_866299 
Protein GI117925682 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.991201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0787545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAA AAGATAAAAT ATTGGTGGTG GATGATGAGC GGGCCACCAT TGACCATCTG 
GTTGCCATTC TTAATGGAGA TCACGCCCTA TGTGTGGCAA AAAATGGTGA GCGGGCGTTG
GCACTGGTAC AAAGCGAGCC TAGGCCAGAC TTAATTTTGT TGGATATTGT GATGCCGGAG
ATGGATGGCT ACGAGGTGTG CCGCCGTTTA AAGGCGGATC CACAGACCTG TGATATTCCG
GTGATTTTTT TAACGGTTAA GAGCTCGGTG GAGGATGAAG CGTATGGGCT GGAGCTGGGG
GCGGTGGACT ATATTGCCAA ACCCATCAGC CCGCCGATTG TTAAGGCACG CATTAAGATC
CATCTGACCG CCATTAATGA ATCAAAAATG CGCCTGCAAA AGGAGCGGGC CGAGGCCGCT
AATCAGGCCA AAAACGCCTT TTTAGCCATG GTCAGTCACG AGATACGCAC GCCGATGAAT
GCCATTATGG GTATGAACGA GCTGCTGACG CTCACGCAAT TAACCGACAA ACAGCAGGAG
TATGTGGCGA CCCAAAAGCG TGCTGGTGAG GATTTGCTTA TCCTGCTTGA TGATGTTTTG
GATGTGTGTG ATATGGAGCG AGGCGCCTTT ACGCTGACGC TCGCACCTTT TTATTTGGCG
GACGTGGTGG CGGTGGTGCA AGCCGTGGTG GGTGCGCAGG CCAGCGCCAA GGGGATTGGC
TTTAACATAA CCTGTCAGAG CGGGCTTGCT GAGCAGTTGG TGGGGGATCG GCACCGTATA
ACCCAGGTAT TGTTGAACCT ATGTGGTAAT GGGGTGAAAT TTACCCATGA GGGTTCGGTC
TCCATGCTGT TAGAGACGCA TCCTAAGGGG GTCTGTTTTG TGGTGCGGGA TACCGGGATT
GGCATTGGCG CGGGGGACCA AGCACGTATT TTTGATGCCT TTAGCCAATC GGATGTCTCC
CTAACACGGC GCTATGGCGG GCTGGGTTTG GGTTTGCATA TTACCCGTCA GTTGGTAGAG
CTCATGCACG GTACGTTGCG TTTGCAGAGC CAGCAAGGGC AGGGCACTAC CTTTACGGTG
GTGATTCCTT TTGAGCAGGT GTCGCAGCCT CAACAGCAAC CGGTTGTAAA GGCCGAACCG
GACCCTGCTA CCATGCAGGC ATTGCCGCGG TTGTCGATTT TGGTTGCGGA GGATGCCGAA
GACAATGCGC TTTTATTGAA ACACTATTTT AAAGAGAGCG GTCATGAACT TACCTTTGCC
AGGGACGGAC AAGAGGCGCT GACCTGCTAC CGGCAGGGAG CGTTTGATCT TATTTTGATG
GATGTGCAGA TGCCTGTCAT GGATGGTTAT GCAGCCACCC GACAAATCCG CTGTTGGGAG
CAGGAGGAGG GGCGGGCGAC CCTGCCCATC GTTGCCCTGA CCGCCCATGC CATGGCCGAT
GCTGTGGCGG AGGCCAAAGC GGCGGGGTGT ACTCAATTTC TCTCTAAGCC CATCCAAAAA
AGACGGCTCA TGGAGGAGAT CAACAACATC ATACAGGCGC GCAGCCAGGG TTGTTAA
 
Protein sequence
MTRKDKILVV DDERATIDHL VAILNGDHAL CVAKNGERAL ALVQSEPRPD LILLDIVMPE 
MDGYEVCRRL KADPQTCDIP VIFLTVKSSV EDEAYGLELG AVDYIAKPIS PPIVKARIKI
HLTAINESKM RLQKERAEAA NQAKNAFLAM VSHEIRTPMN AIMGMNELLT LTQLTDKQQE
YVATQKRAGE DLLILLDDVL DVCDMERGAF TLTLAPFYLA DVVAVVQAVV GAQASAKGIG
FNITCQSGLA EQLVGDRHRI TQVLLNLCGN GVKFTHEGSV SMLLETHPKG VCFVVRDTGI
GIGAGDQARI FDAFSQSDVS LTRRYGGLGL GLHITRQLVE LMHGTLRLQS QQGQGTTFTV
VIPFEQVSQP QQQPVVKAEP DPATMQALPR LSILVAEDAE DNALLLKHYF KESGHELTFA
RDGQEALTCY RQGAFDLILM DVQMPVMDGY AATRQIRCWE QEEGRATLPI VALTAHAMAD
AVAEAKAAGC TQFLSKPIQK RRLMEEINNI IQARSQGC