Gene Synpcc7942_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1221 
Symbol 
ID3773509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1242455 
End bp1242832 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content48% 
IMG OID637799650 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_400238 
Protein GI81300030 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATA TCCTCGTTGT TGATGACAGC AGTCTCTACC TAGAACTTGC CCGTCAAGCC 
TTAGTTGATC ATGGCCACCA GGTTGAACTT GCCAACAACG GTCAAGAAGC CTTGCAATCC
GTCGCCAACA AGAAGCCTGA CTTGATTCTG CTCGATATCG TTATGCCAGA AATGAATGGC
TACGACGTAC TGCGATCGCT CAAGAAATCA GCTGAAAACG CTACGATTCC TGTCATTCTT
TGCTCGACCA AAGGCGAGGA TTTTGACAAG TATTGGGGGC TCAAACAGGG AGCCAATGCC
TACTTGACTA AGCCCTATGA ACCAACCGAA CTATTGCTAT TGGTGCAGGA ACAACTGACT
GCAGCCCGCA ATTCTTGA
 
Protein sequence
MANILVVDDS SLYLELARQA LVDHGHQVEL ANNGQEALQS VANKKPDLIL LDIVMPEMNG 
YDVLRSLKKS AENATIPVIL CSTKGEDFDK YWGLKQGANA YLTKPYEPTE LLLLVQEQLT
AARNS