| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3764 |
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| Symbol | |
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| ID | 5610161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4586599 |
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| End bp | 4586964 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934718 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001475496 |
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| Protein GI | 157376896 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.105051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAAAA GTAAAATCCT GATAATTGAT GATGATCCTG TGTGTACCGG GGTCTTACTC
GCTATCTTAG GCGACGATTA TGATGTAACG ACCGCCAACT CCGGCAGTGG CGGCATCGAT
ATATTAAGTT CACAGACGCC CGATCTTATC CTGCTCGATA TCACCATGCC GGAAGTGAAT
GGTTATCAAG TCCTTAAGTT CCTCCAGGAG GACCCGTCAC GCATCGATAT CCCTGTGGTG
GTGATCAGCA CCTTGGTCGA GAGCTCAGAT CAGGAGTTCG CTATCAAACT CGGCGCTGAC
GATTACGTCA ACAAACCTAT CATGCCAAAT GTGATACAGG AGAAACTCGA AAAGTATCTC
CGATAA
|
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| Protein sequence | MDKSKILIID DDPVCTGVLL AILGDDYDVT TANSGSGGID ILSSQTPDLI LLDITMPEVN
GYQVLKFLQE DPSRIDIPVV VISTLVESSD QEFAIKLGAD DYVNKPIMPN VIQEKLEKYL
R
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