Gene PMT9312_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1712 
Symbol 
ID3766537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1600804 
End bp1601550 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content39% 
IMG OID637798256 
Producttwo component transcriptional regulator 
Protein accessionYP_398209 
Protein GI78780097 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAG CAAGAATTTT AGTTGTTGAT GATGAACCTG CAGTTTTGAA GGTATTAGTT 
ACAAGGCTTC AACTAGCAGG ATATCAAGTT TTTTCAGCCA CTAACGGCGA AGAAGCTATT
GAATCTTTTC ACAGGGATTC CCCAGATTTG ATAGTTCTTG ATGTTATGCT TCCAAAAATG
GATGGATTCG CAGTTTGCAG AAGAATTAGA GCTGAATCAG TAGTGCCAAT AATATTCTTA
ACCGCTCTAG AGGCTATTTC AGAAAGAGTT GCAGGTTTGG ACTTAGGTGC TGATGATTAC
TTATCTAAAC CATTTAGCCC AAAAGAATTA GAGGCTAGGA TAGCTACTAT TTTGAGAAGA
ATGGGACCTA CTGTATCGGT TGCTGAAACT AAAGAAGTTC CATCTGGCAA AGGAGTTATG
AAATTTGGAA GTTTAGTTGT TGATACTAAT CGTCGACAAG TTTCTAGAGC AGGGGAAAGA
ATTAGTCTAA CTTATACTGA ATTTAGCCTC TTAGAATTAT TATTCGACGA GCCTGGTAAA
GTTGTTCCTC GAGCAGAAAT TTTAGAACAG CTATGGGGTT ATCCGCCTCG TAGAGCTGCA
GATTTAAGAG TTGTAGATGT ATATGTCGCA AGACTAAGGG GTAAATTGGA ACCAGATCCA
AGAAATCCAG AATTAATATT AACTGTTAGA GGGATCGGTT ATGCGTCTCA GAGAGTTGGC
GAAACAGCAA CATCTTTGGC AAGTTGA
 
Protein sequence
MSKARILVVD DEPAVLKVLV TRLQLAGYQV FSATNGEEAI ESFHRDSPDL IVLDVMLPKM 
DGFAVCRRIR AESVVPIIFL TALEAISERV AGLDLGADDY LSKPFSPKEL EARIATILRR
MGPTVSVAET KEVPSGKGVM KFGSLVVDTN RRQVSRAGER ISLTYTEFSL LELLFDEPGK
VVPRAEILEQ LWGYPPRRAA DLRVVDVYVA RLRGKLEPDP RNPELILTVR GIGYASQRVG
ETATSLAS