More than 300 homologs were found in PanDaTox collection
for query gene Saro_3663 on replicon NC_009427
Organism: Novosphingobium aromaticivorans DSM 12444



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009427  Saro_3663  short-chain dehydrogenase/reductase SDR  100 
 
 
253 aa  504  9.999999999999999e-143  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.61736  n/a   
 
 
-
 
NC_009511  Swit_3289  short-chain dehydrogenase/reductase SDR  64.43 
 
 
250 aa  291  6e-78  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.191816 
 
 
-
 
NC_007511  Bcep18194_B1509  Short-chain dehydrogenase/reductase SDR  62.3 
 
 
251 aa  285  5.999999999999999e-76  Burkholderia sp. 383  Bacteria  normal  0.419591  normal  0.577034 
 
 
-
 
NC_013510  Tcur_3491  short-chain dehydrogenase/reductase SDR  55.95 
 
 
253 aa  264  1e-69  Thermomonospora curvata DSM 43183  Bacteria  normal  0.260507  n/a   
 
 
-
 
NC_010512  Bcenmc03_6905  short-chain dehydrogenase/reductase SDR  41.94 
 
 
254 aa  165  6.9999999999999995e-40  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0258116  normal 
 
 
-
 
NC_009427  Saro_3717  short-chain dehydrogenase/reductase SDR  41.3 
 
 
249 aa  155  9e-37  Novosphingobium aromaticivorans DSM 12444  Bacteria  hitchhiker  0.00704211  n/a   
 
 
-
 
NC_008726  Mvan_5778  short-chain dehydrogenase/reductase SDR  36 
 
 
256 aa  150  2e-35  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_009511  Swit_0335  short-chain dehydrogenase/reductase SDR  44 
 
 
252 aa  145  8.000000000000001e-34  Sphingomonas wittichii RW1  Bacteria  normal  0.0299657  normal 
 
 
-
 
NC_009427  Saro_3609  short-chain dehydrogenase/reductase SDR  40.65 
 
 
263 aa  134  9.999999999999999e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.544133  n/a   
 
 
-
 
NC_009077  Mjls_4196  short-chain dehydrogenase/reductase SDR  38.15 
 
 
273 aa  132  3.9999999999999996e-30  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6823  short-chain dehydrogenase/reductase SDR  34.54 
 
 
258 aa  131  9e-30  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1313  short-chain dehydrogenase/reductase SDR  37.56 
 
 
262 aa  131  1.0000000000000001e-29  Spirosoma linguale DSM 74  Bacteria  normal  0.133593  normal  0.554394 
 
 
-
 
NC_009427  Saro_3716  short-chain dehydrogenase/reductase SDR  39.27 
 
 
266 aa  129  3e-29  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0314818  n/a   
 
 
-
 
NC_013204  Elen_2515  short-chain dehydrogenase/reductase SDR  37.94 
 
 
255 aa  130  3e-29  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9335  short-chain dehydrogenase/reductase SDR  34.84 
 
 
250 aa  129  4.0000000000000003e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.728753  normal  0.802866 
 
 
-
 
NC_009486  Tpet_0594  short-chain dehydrogenase/reductase SDR  37.6 
 
 
251 aa  128  8.000000000000001e-29  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000426585  n/a   
 
 
-
 
NC_010483  TRQ2_0608  short-chain dehydrogenase/reductase SDR  37.6 
 
 
251 aa  128  8.000000000000001e-29  Thermotoga sp. RQ2  Bacteria  normal  0.236394  n/a   
 
 
-
 
NC_009954  Cmaq_1385  short-chain dehydrogenase/reductase SDR  36.55 
 
 
248 aa  128  9.000000000000001e-29  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2162  3-ketoacyl-(acyl-carrier-protein) reductase  35.83 
 
 
252 aa  128  1.0000000000000001e-28  Ralstonia pickettii 12D  Bacteria  normal  0.0100529  normal  0.780963 
 
 
-
 
NC_011892  Mnod_8333  short-chain dehydrogenase/reductase SDR  35.08 
 
 
257 aa  127  2.0000000000000002e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.319832  n/a   
 
 
-
 
NC_007925  RPC_3478  short-chain dehydrogenase/reductase SDR  35.46 
 
 
255 aa  127  2.0000000000000002e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3548  short-chain dehydrogenase/reductase SDR  36.44 
 
 
257 aa  125  7e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6225  short-chain dehydrogenase/reductase SDR  35.74 
 
 
252 aa  125  7e-28  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2351  3-ketoacyl-(acyl-carrier-protein) reductase  34 
 
 
252 aa  124  1e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  0.647461  normal 
 
 
-
 
NC_013440  Hoch_4406  short-chain dehydrogenase/reductase SDR  34.01 
 
 
253 aa  124  1e-27  Haliangium ochraceum DSM 14365  Bacteria  normal  0.410481  normal 
 
 
-
 
NC_007778  RPB_1751  Short-chain dehydrogenase/reductase SDR  36.03 
 
 
257 aa  124  1e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0168825 
 
 
-
 
NC_007958  RPD_3206  short-chain dehydrogenase/reductase SDR  36.25 
 
 
255 aa  124  1e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0494  short-chain dehydrogenase/reductase SDR  33.85 
 
 
252 aa  123  2e-27  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2567  3-ketoacyl-(acyl-carrier-protein) reductase  35.04 
 
 
252 aa  123  3e-27  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2131  short-chain dehydrogenase/reductase SDR  34.88 
 
 
262 aa  122  5e-27  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01007  short chain dehydrogenase  35.25 
 
 
253 aa  122  5e-27  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.393478  n/a   
 
 
-
 
NC_008146  Mmcs_4414  short-chain dehydrogenase/reductase SDR  36.03 
 
 
262 aa  122  6e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4795  short-chain dehydrogenase/reductase SDR  36.03 
 
 
262 aa  122  6e-27  Mycobacterium sp. JLS  Bacteria  normal  normal  0.368954 
 
 
-
 
NC_008705  Mkms_4501  short-chain dehydrogenase/reductase SDR  36.03 
 
 
262 aa  122  6e-27  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0479  short-chain dehydrogenase/reductase SDR  33.46 
 
 
252 aa  122  7e-27  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1270  Short-chain dehydrogenase  34.82 
 
 
248 aa  122  8e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2036  short-chain dehydrogenase/reductase SDR  34.26 
 
 
258 aa  121  9e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4258  short-chain dehydrogenase/reductase SDR  35.29 
 
 
253 aa  121  9e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  0.414505 
 
 
-
 
NC_011729  PCC7424_0224  7-alpha-hydroxysteroid dehydrogenase  34.12 
 
 
255 aa  121  9.999999999999999e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.717009 
 
 
-
 
NC_008025  Dgeo_0146  short chain dehydrogenase  35.08 
 
 
277 aa  121  9.999999999999999e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1619  short-chain dehydrogenase/reductase SDR  35.77 
 
 
253 aa  120  1.9999999999999998e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.901509  normal  0.0346671 
 
 
-
 
NC_011661  Dtur_1771  short-chain dehydrogenase/reductase SDR  34 
 
 
252 aa  120  1.9999999999999998e-26  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3623  short chain dehydrogenase  36.03 
 
 
253 aa  120  3e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0211534  n/a   
 
 
-
 
NC_010676  Bphyt_5327  short-chain dehydrogenase/reductase SDR  34.41 
 
 
248 aa  120  3e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0136754  normal 
 
 
-
 
NC_008726  Mvan_4971  short-chain dehydrogenase/reductase SDR  35.22 
 
 
262 aa  119  3e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.143414  normal 
 
 
-
 
NC_014165  Tbis_1584  short-chain dehydrogenase/reductase SDR  35.06 
 
 
264 aa  119  3.9999999999999996e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.296993 
 
 
-
 
NC_010085  Nmar_0026  short-chain dehydrogenase/reductase SDR  32.93 
 
 
269 aa  119  4.9999999999999996e-26  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_007778  RPB_2264  Short-chain dehydrogenase/reductase SDR  35.46 
 
 
255 aa  119  4.9999999999999996e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.136651  normal 
 
 
-
 
NC_009441  Fjoh_4444  short-chain dehydrogenase/reductase SDR  31.75 
 
 
246 aa  119  4.9999999999999996e-26  Flavobacterium johnsoniae UW101  Bacteria  normal  0.740498  n/a   
 
 
-
 
NC_011830  Dhaf_3817  3-oxoacyl-(acyl-carrier-protein) reductase  35.69 
 
 
247 aa  119  6e-26  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.00000000000000217117  n/a   
 
 
-
 
NC_013510  Tcur_0455  short-chain dehydrogenase/reductase SDR  33.99 
 
 
269 aa  118  7.999999999999999e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4436  short-chain dehydrogenase/reductase SDR  34.35 
 
 
265 aa  118  9e-26  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4043  Short-chain dehydrogenase/reductase SDR  32.27 
 
 
254 aa  117  9.999999999999999e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4233  short-chain dehydrogenase/reductase SDR  34.41 
 
 
257 aa  118  9.999999999999999e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0264  putative short-chain dehydrogenase  35.51 
 
 
262 aa  118  9.999999999999999e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0675  3-ketoacyl-(acyl-carrier-protein) reductase  35.8 
 
 
253 aa  117  9.999999999999999e-26  Cupriavidus metallidurans CH34  Bacteria  normal  0.228459  normal  0.478782 
 
 
-
 
NC_011831  Cagg_2751  short-chain dehydrogenase/reductase SDR  34.52 
 
 
252 aa  117  9.999999999999999e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal 
 
 
-
 
NC_009485  BBta_7068  SDR family dehydrogenase/reductase  34.01 
 
 
257 aa  117  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.894165 
 
 
-
 
NC_009675  Anae109_3255  short-chain dehydrogenase/reductase SDR  36.55 
 
 
250 aa  117  1.9999999999999998e-25  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_6315  short-chain dehydrogenase/reductase SDR  36.68 
 
 
255 aa  117  1.9999999999999998e-25  Sinorhizobium medicae WSM419  Bacteria  normal  0.24294  normal 
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  36.25 
 
 
254 aa  117  1.9999999999999998e-25  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
NC_011757  Mchl_1526  short-chain dehydrogenase/reductase SDR  36.25 
 
 
254 aa  117  1.9999999999999998e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3704  short-chain dehydrogenase/reductase SDR  31.35 
 
 
257 aa  117  1.9999999999999998e-25  Chelativorans sp. BNC1  Bacteria  normal  0.416119  n/a   
 
 
-
 
NC_008786  Veis_3594  short-chain dehydrogenase/reductase SDR  35.83 
 
 
261 aa  117  1.9999999999999998e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.806821  normal  0.214566 
 
 
-
 
NC_008726  Mvan_1624  short-chain dehydrogenase/reductase SDR  36.69 
 
 
256 aa  117  1.9999999999999998e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0419778 
 
 
-
 
NC_009338  Mflv_1776  short-chain dehydrogenase/reductase SDR  34.55 
 
 
262 aa  117  3e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.869283 
 
 
-
 
NC_013730  Slin_2192  short-chain dehydrogenase/reductase SDR  31.45 
 
 
256 aa  117  3e-25  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.0046226 
 
 
-
 
NC_009012  Cthe_1433  short-chain dehydrogenase/reductase SDR  32.93 
 
 
257 aa  116  3e-25  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0453  short-chain dehydrogenase/reductase SDR  33.73 
 
 
284 aa  116  3e-25  Spirosoma linguale DSM 74  Bacteria  normal  0.22798  normal 
 
 
-
 
NC_013411  GYMC61_1802  gluconate 5-dehydrogenase  33.07 
 
 
260 aa  116  3.9999999999999997e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_0642  short-chain dehydrogenase/reductase SDR  32.41 
 
 
252 aa  115  3.9999999999999997e-25  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.220005 
 
 
-
 
NC_008228  Patl_2139  short chain dehydrogenase  37.67 
 
 
254 aa  116  3.9999999999999997e-25  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2614  short-chain dehydrogenase/reductase SDR  34.01 
 
 
257 aa  116  3.9999999999999997e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.042976  n/a   
 
 
-
 
NC_004578  PSPTO_1056  oxidoreductase, short chain dehydrogenase/reductase family  34.68 
 
 
254 aa  115  5e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_1528  short-chain dehydrogenase/reductase SDR  33.86 
 
 
246 aa  115  5e-25  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.606354  normal 
 
 
-
 
NC_009485  BBta_0919  putative oxidoreductase  34.66 
 
 
257 aa  115  6e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.902502  normal  0.888241 
 
 
-
 
NC_008686  Pden_1255  3-ketoacyl-(acyl-carrier-protein) reductase  36.65 
 
 
247 aa  115  6e-25  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  34.9 
 
 
258 aa  115  6e-25  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_011368  Rleg2_4511  gluconate 5-dehydrogenase  33.59 
 
 
254 aa  115  6e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2905  short-chain dehydrogenase/reductase SDR  38.06 
 
 
249 aa  115  6.9999999999999995e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0428484  normal 
 
 
-
 
NC_013501  Rmar_2206  short-chain dehydrogenase/reductase SDR  36.69 
 
 
266 aa  115  6.9999999999999995e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  0.416605  n/a   
 
 
-
 
NC_010338  Caul_0851  short-chain dehydrogenase/reductase SDR  32.67 
 
 
254 aa  115  7.999999999999999e-25  Caulobacter sp. K31  Bacteria  normal  0.0597888  normal  0.281853 
 
 
-
 
NC_013730  Slin_5557  short-chain dehydrogenase/reductase SDR  35.19 
 
 
272 aa  115  7.999999999999999e-25  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1396  short chain dehydrogenase  34.82 
 
 
253 aa  114  1.0000000000000001e-24  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5444  short-chain dehydrogenase/reductase SDR  32.94 
 
 
255 aa  114  1.0000000000000001e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.844576  n/a   
 
 
-
 
NC_011831  Cagg_1587  short-chain dehydrogenase/reductase SDR  35.32 
 
 
256 aa  114  1.0000000000000001e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1799  short-chain dehydrogenase/reductase SDR  34.1 
 
 
261 aa  114  1.0000000000000001e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007948  Bpro_0516  short-chain dehydrogenase/reductase SDR  35.27 
 
 
249 aa  114  1.0000000000000001e-24  Polaromonas sp. JS666  Bacteria  normal  0.875683  normal 
 
 
-
 
NC_009719  Plav_3083  short-chain dehydrogenase/reductase SDR  35.04 
 
 
259 aa  115  1.0000000000000001e-24  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.192229  normal  0.191447 
 
 
-
 
NC_010501  PputW619_1425  short chain dehydrogenase  34.41 
 
 
253 aa  114  2.0000000000000002e-24  Pseudomonas putida W619  Bacteria  normal  0.857979  normal  0.357324 
 
 
-
 
NC_009439  Pmen_2680  short chain dehydrogenase  34.41 
 
 
253 aa  113  2.0000000000000002e-24  Pseudomonas mendocina ymp  Bacteria  normal  0.313407  normal  0.819387 
 
 
-
 
NC_011726  PCC8801_1575  short chain dehydrogenase  34.54 
 
 
249 aa  113  2.0000000000000002e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007412  Ava_C0109  short chain dehydrogenase  35.08 
 
 
251 aa  114  2.0000000000000002e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2160  Short-chain dehydrogenase/reductase  36.55 
 
 
254 aa  114  2.0000000000000002e-24  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3812  short-chain dehydrogenase/reductase SDR  35.6 
 
 
255 aa  114  2.0000000000000002e-24  Opitutus terrae PB90-1  Bacteria  normal  0.466174  normal  0.349855 
 
 
-
 
NC_007951  Bxe_A2879  putative alcohol dehydrogenase, zinc-independent  35.38 
 
 
265 aa  114  2.0000000000000002e-24  Burkholderia xenovorans LB400  Bacteria  normal  0.575303  normal  0.558378 
 
 
-
 
NC_011666  Msil_3776  short-chain dehydrogenase/reductase SDR  35.46 
 
 
247 aa  114  2.0000000000000002e-24  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_013730  Slin_6198  short-chain dehydrogenase/reductase SDR  34.68 
 
 
260 aa  114  2.0000000000000002e-24  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5815  short-chain dehydrogenase/reductase SDR  37.1 
 
 
270 aa  114  2.0000000000000002e-24  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.309971 
 
 
-
 
NC_010338  Caul_1922  short-chain dehydrogenase/reductase SDR  39.37 
 
 
270 aa  113  3e-24  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
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