| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2131 |
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| Symbol | |
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| ID | 5662524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2583010 |
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| End bp | 2583798 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236734 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001501986 |
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| Protein GI | 157961952 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTCAA ATAGTATTAA TCATGCTCGC CTTCTAGGAA AAGTCGCATT TATTACCGGA
GCTGGCAGTG GTATTGGTGC AGCGACAGCA GTTCGTTTAG CTGCTGAAGG GGCGAAGGTT
ATGATTTGTG GTAGAAATCA GCCGCCTTTA GATCTTGTTG TAGCGCAGAT AAAGCAGGCC
GGTGGTGTGG CTACTGCAGT TATTGCAGAT GTGTCTAATG AAACTGAGCT CGTAGCAGCG
ATAGAACGAT GTGCTAGCGA ATATGGTTCA CTAGACATTA TGGTCAACAA TGCGATGGCC
TTTACTTGGG GCAGTATCGA AGAGATGGAC ACGCAAGCTT GGCATGAAAA TTTCAAAACC
TCAGTAGACG GTACCTTTTG GGGAACAAAG GCCGCAATGA AATTAATGAA AAGTAATGGT
GGCAGTATCA TCAATTTATC ATCAATTTGT GGCGAGCTAG GAACCCCATG GATGTCAGGC
TATAGCGCAG CTAAAGCCGC AGTGACTAAT TTTTCAAGAG CCGCTGCAGC CGAAGGCGCA
GCGAGCAACA TCCGCGTCAA TACCGTCATT CCGGCTGTTG TTGAAACACC AGCTACAGAG
GGGATGCTCT CAAATGCCAC CGCTCGAAAG AACACTGAAC GGTTAATTCC TATGGGGCGA
GTAGGACAAC CAGATGAATT AGCATCTGTT ATCGCATTTC TTGCCAGTGA TGAAGCATCC
TATGTCACCG GCGTTAGCTT ACCTGTCGAT GGTGGCCGAG CAGCTGTACT CGTTACGGCA
ATGGATTGA
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| Protein sequence | MQSNSINHAR LLGKVAFITG AGSGIGAATA VRLAAEGAKV MICGRNQPPL DLVVAQIKQA
GGVATAVIAD VSNETELVAA IERCASEYGS LDIMVNNAMA FTWGSIEEMD TQAWHENFKT
SVDGTFWGTK AAMKLMKSNG GSIINLSSIC GELGTPWMSG YSAAKAAVTN FSRAAAAEGA
ASNIRVNTVI PAVVETPATE GMLSNATARK NTERLIPMGR VGQPDELASV IAFLASDEAS
YVTGVSLPVD GGRAAVLVTA MD
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