| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6905 |
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| Symbol | |
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| ID | 6125816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 1007542 |
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| End bp | 1008306 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641647911 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001774503 |
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| Protein GI | 170735389 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0258116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATACGA AAAAACTAGC AGACAAGGTC GCCATCGTGA CAGGAGGCGG GCAAGGCGTC
GGACTCGGCA TTGCCCGCTC GCTTGCCGCC GAGGGTGCGT GCCTGGTGTT GACGGGTCGC
ACGCAAAACA AACTTGCGCA GGCCGCCGAG GAATTGAGTG CCCTCGGTTC GCAAGTGCTC
GTCGTGCCTG GCGATACGCG CGATCGTGCC AACGCCACGC GCACGGTCGA ACGTGCGATC
GAGCGATTCG GTCGCGTGGA CGCGCTTGTC AACAACGCAC AAAGCAGCAA CCCGGGTGTT
CCGCTCGAGT CGGTGAACGA CGACGACTGG AACGACACGC TCGAGTCTGG CTTGTACGGA
ACGCTGTATT TCATGCAGGC CGTATTGCCG CGGATGAAGG CCCAGGGCCG CGGCACCATC
GTCAATTTTG GCTCGCGCAC TGGCATCGAA GGGCTCAAGG GATTCGGCGC CTACGCCGCA
ACCAAGGAAG GCATTCGAGG GCTTTCACGT GTTGCCGCGC GCGAATGGGG CGCATATGGC
ATTACCGTCA ACGTCATTTG CCCGGCAGCG CTCACGCCAG CCGCTGAAGC GTACCTCGAA
GCCAATCCCC AGGAACGCAC GCGCTATCTC TCTGAGATCG CTCTTGGCCG CTTCGGGGAT
CCCGAGCGCG ATATTGGTCG AACAGTTGCA TTTCTGTGTA GTGACGATGC GAGTTTCATC
ACAGGGCAGA CTATCAGTGT GGACGGCGGA CAGTCAATGC TTTAG
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| Protein sequence | MYTKKLADKV AIVTGGGQGV GLGIARSLAA EGACLVLTGR TQNKLAQAAE ELSALGSQVL
VVPGDTRDRA NATRTVERAI ERFGRVDALV NNAQSSNPGV PLESVNDDDW NDTLESGLYG
TLYFMQAVLP RMKAQGRGTI VNFGSRTGIE GLKGFGAYAA TKEGIRGLSR VAAREWGAYG
ITVNVICPAA LTPAAEAYLE ANPQERTRYL SEIALGRFGD PERDIGRTVA FLCSDDASFI
TGQTISVDGG QSML
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