| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0335 |
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| Symbol | |
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| ID | 5200967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 357327 |
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| End bp | 358085 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579875 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001260844 |
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| Protein GI | 148553262 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0299657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGGC TCAGCGGCAA GGTCGCGATC ATCACCGGCG GCGGTCAGGG CGTGGGCCAG
GGCATCACCC AGGTCTTCGC GCGCGAAGGC GCCAGGGTGC TGATCACCGG CCGCACCCCC
GACAAGCTGG AGGCGGCGGT CGCCGAACTC AAGGCGGCCG GCGGCGACGC CGCCTGGATC
GCCGGCACCG CCGGGGTCCG CGCCGATGCC GAGGCGGCCG TCGCCAGGGC GGTAGAACTG
TTCGGCGGGC TCGACATCCT GGTCAACAAC GCCCAGACCT CGCGCCCCGG CGCGCTGTTC
GAGGATACCG ACGACGATCT GTTCGCGCTG ACGATCAACT CGGGGCTCTA CGGCACCTTC
CAGCACATGC AGGCGGCGCT GCCCGCGATG AAGAAGCGCG GCGGCGGATC GATCATCAAC
TTCGGCTCCT ATGAAGGCAT CCACGGCGGC ATCGGCTTCG CCGCCTATGC CGCTACCAAG
GAGGCCATTC GCGGCCTGTC GCGCACCGCC GCGCGCGAGC TGGGCAAGCA CAAGGTCCGC
GTCAACGTGA TCTGCCCCGC CGCGCTGAGC CCGATCGCCG AGCAATGGGT CAAGGACTTC
CCCGAGGAGG CCGAGAAGGT GATGAAGCTC GTCGCGCTCG GCTATCTGGG CGACTGCGCC
GAGGACATCG GCCCGGCCGC GTTGTTCCTG GCCAGCGACG ACAGCCGCTA CGTCACCGGC
CAGACGATCA ACGTCGACGG CGGCCAGATG ATGCTCTGA
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| Protein sequence | MGRLSGKVAI ITGGGQGVGQ GITQVFAREG ARVLITGRTP DKLEAAVAEL KAAGGDAAWI
AGTAGVRADA EAAVARAVEL FGGLDILVNN AQTSRPGALF EDTDDDLFAL TINSGLYGTF
QHMQAALPAM KKRGGGSIIN FGSYEGIHGG IGFAAYAATK EAIRGLSRTA ARELGKHKVR
VNVICPAALS PIAEQWVKDF PEEAEKVMKL VALGYLGDCA EDIGPAALFL ASDDSRYVTG
QTINVDGGQM ML
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