Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6315 |
Symbol | |
ID | 5320617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 1230115 |
End bp | 1230882 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640777913 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001314845 |
Protein GI | 150378250 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.24294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCACC CGATCTTCGA CCTTTCCGGC CGCCGCGCCC TCGTCACCGG AGCAAGCCGC GGCATTGGAC AGTCTATCGC TTTGGCTCTG GCCGAGGCCG GGGCGGACGT GGCCGTGACG GCGCGAACGA TCGATGGCCT GGAAGAGACC AGGGCTTTGA TCGAAAAGGT CGGAAGGCGC GCGGTGGCGT TTGCCCAGGA TGTGCGCGAT GTCGGGGCTT GCGGAAGTGT GACGGGAGCG GCGGCCGAGC GCTTGGGCGG CCTTGATATT CTCGTCAACA ACGCCGGCTT CGAGAACGTC AGACCGTCCT TCGACGTAGA CGAGGCGCTC TGGGAAACGA TCATTTCGAC CAATCTGAAA GGCGCCTTCT TCTGTGCGCA GGCGGCAGGC CGGATCATGG CGGAAGCGAA CGGCGGCGCG ATCGTCAATC TCTGCTCGCT GACATCCTAT GTCGGCATTC CGACGGCAGC TCCCTACGGC GCCTCGAAGT CCGGCCTGCT TGGAGTGACA CGGGCACTTG CAACGGAATG GGCAGCGCAC AATATCCGCG TCAACGCAAT CGCTCCCGGC TATTTCCGCA CTGCCATGAC GGAGGTCTTC TACGAGGACG AGGGCTGGCA ACAGCAGATG CTGGGGAAAA TCCCGCAACG GCGGTTCGGC AAGGAAAGCG ATATCGGCGG CGTCGCGGTT TTCCTCTGCG GCGATGCGGC GGCCTATGTC ACGGGGCATT GCATTCCGGT CGACGGCGGC TATCTCGCCT CGATCTGA
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Protein sequence | MTHPIFDLSG RRALVTGASR GIGQSIALAL AEAGADVAVT ARTIDGLEET RALIEKVGRR AVAFAQDVRD VGACGSVTGA AAERLGGLDI LVNNAGFENV RPSFDVDEAL WETIISTNLK GAFFCAQAAG RIMAEANGGA IVNLCSLTSY VGIPTAAPYG ASKSGLLGVT RALATEWAAH NIRVNAIAPG YFRTAMTEVF YEDEGWQQQM LGKIPQRRFG KESDIGGVAV FLCGDAAAYV TGHCIPVDGG YLASI
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