| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5327 |
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| Symbol | |
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| ID | 6278650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1509373 |
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| End bp | 1510119 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642616413 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001889056 |
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| Protein GI | 187920025 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0136754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC CCGTCGTTCT GATCACCGGC GCACTCACCG GCATCGGCCG CGCCACTGCC
TTCGCCTTTG CCGACAGCGG CGCCCGTCTC GTCGTCTCCG GCCGTCGCGA AGTCGAAGGC
AAGGCCCTCG AAAAAGAACT GCGCGAACTC GGCGCGGACG CCCACTTCAT CCAGGCCGAC
GTGCGCCGCG ACGACGAAGT CGCGAACCTC GTCGACCAGA CAGTCGCGCG CTTCGGCCGC
ATCGACGCCG CCGTGAACAA CGCCGGCACC GAAGGCCAGC CCGGCGCGAT CACGAGTCAA
ACCGTCGAGA GCTACAGCGC CACGTTCGAC ACCAACGTGC TCGGCACGCT GCTCAGCATG
AAGCACGAAC TGCGCGTGAT GTCGGCGCAA AAGAGCGGCA GCGTAGTGAA CGTTTCGTCG
ACGTACGGCC ACGAAGGCGC GGCCTTCGCT TCCGTGTACG CCGGCAGCAA GCATGCGGTG
GAAGGCATGA CGAAGTCGGC GGCGCTCGAA GTGGCGTCCA CCGGCGTGCG GGTCAACGCG
GTCGCGCCGG GGCCGACCGA TACCGGCATG CTCGACCGCT TCACCGGCAC GCCGGAGAAC
AAGGCCGCGC TCGCCGCCAA GGTGCCGCTC GGCCGGGTCG GCCAGCCGGT CGATGTGGCG
CGCGCCGTCG TGTTCCTGGC GTCGGAGGCG GCGTCGTTCA TCACGGGGCA GATCTTGACC
GTCGACGGCG GTAAGACGGC GGGCTGA
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| Protein sequence | MSQPVVLITG ALTGIGRATA FAFADSGARL VVSGRREVEG KALEKELREL GADAHFIQAD
VRRDDEVANL VDQTVARFGR IDAAVNNAGT EGQPGAITSQ TVESYSATFD TNVLGTLLSM
KHELRVMSAQ KSGSVVNVSS TYGHEGAAFA SVYAGSKHAV EGMTKSAALE VASTGVRVNA
VAPGPTDTGM LDRFTGTPEN KAALAAKVPL GRVGQPVDVA RAVVFLASEA ASFITGQILT
VDGGKTAG
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