| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5815 |
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| Symbol | |
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| ID | 5751436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6471898 |
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| End bp | 6472710 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641300947 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001566828 |
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| Protein GI | 160901246 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.309971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGC AGCAGCGTCA GTTGGAACTG GCCGGTCCCC TGCCAGCCCT TGCACCATCG
GGGCGGCTCC GGGGGCGTGT CTGCCTGGTG GTGGGCGCCA CCAGCGGCAT AGGCCGGGCT
ACCGCCTTGC GCATGGCCGA GGAGGGCGCT GCCGCCGTGG TGGTCACGGG GCGCCGCCGT
GAGCTGGGCC TGCAGCTGGA GCAGGAAATC CGGCAGCGGG GGGCAGACGG CCTTTTCCTG
GCCTGCGATG CAACGCGGCA GGAGGACATG GCGGCGGTGG TGGAGCAGGC CGTGGAGCGC
TTCGGGCGGC TGGACGCGGC CTTCAACAAT GCGGGCTTCC AGGAGCGGCG TGCCGTGCTG
GCCGAGCAGG ATGACGCGGT CTTTTCCCAG GTCTTCGATA CGAATGTGCG TGCGGTCTTC
CACGCCATGC GCCATGAACT GGCGGCCATG CTGGCCGCGG GCGGCGGCAC CATCGTGAAC
AACACCAGCG TCAGCGGCAT ACGCAATCCC AACCCGGGCC TGTCGCTGTA CGGCGCCTCC
AAGGCGGCGG CCCTGTCGCT GACCCGCGCC GCCGCCATGG AGTACGCGCC GCGCGGCATC
CGCATCAATG CCGTTGCCCC TGGCCGCGTG GTCACGGACA TGATGCTGGG CTCAGGCATT
GCCGACATGC ATGCCGTGGC GGCGGGCCTG CCGCTGCGGC GCATGGGCCA TCCGCAGGAG
GTGGCCACGG CCGTCGTCTG GCTGATGTCG GACGAGGCGG CCTTTGTGGT CGGGCACTGC
CTGGCGACCG ATGGCGGCTT CCTGGCCGGA TGA
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| Protein sequence | MDMQQRQLEL AGPLPALAPS GRLRGRVCLV VGATSGIGRA TALRMAEEGA AAVVVTGRRR
ELGLQLEQEI RQRGADGLFL ACDATRQEDM AAVVEQAVER FGRLDAAFNN AGFQERRAVL
AEQDDAVFSQ VFDTNVRAVF HAMRHELAAM LAAGGGTIVN NTSVSGIRNP NPGLSLYGAS
KAAALSLTRA AAMEYAPRGI RINAVAPGRV VTDMMLGSGI ADMHAVAAGL PLRRMGHPQE
VATAVVWLMS DEAAFVVGHC LATDGGFLAG
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