| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4196 |
|---|
| Symbol | |
|---|
| ID | 4879902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 4433673 |
|---|
| End bp | 4434494 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640141505 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001072459 |
|---|
| Protein GI | 126436768 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGGT TGGGCGGTAA GGTCGCCGTC GTCACAGGAG CCGGCAAGGG CATCGGCCGG
GGCATCGCTC GCCGGTTCGC CCGCGAGGGC GCGAAAGTCA TTGCCGCTGA GCTAGATCGG
GATGCGGGCA AGCAGGTGGT GGAGGACATC GGTGAGCTCG GCGGCGAAGG GCTGTTCGTG
CAGACCGATG TGTCCCGGAA GACCGATATC GAGGGCGCTA TCACCGCCGC GCAGGAGTCC
TTCGGCGGAC TCGACATCCT GGTCAACAAC GCCATCGCGC TGACGCCGGA CGTCCCGTTG
GAGTACAAGA CGGACGAAAT GCTCGAGCAG ACGATGAAAG TCGGATTGTG GAGTGTCTGG
TGGGGCATGC AGACCGCGTT CCCGCTGATG AAGGCCCGCG GCGGAGGACG GATCATCAAC
TTCTATTCGA TCGACGCCGA CAACGGCAAC TGGGTCCACG GTGACTACAA CACCGCGAAG
GGCGGTGTGC AGGCACTGAC CCGCACGGCC GGCTTCCAGT GGGCACGCCA CAACATCTGT
GTCAACGCCA TCGCGCCGAT CGCCGCCTCA GCCGCTTTCG AACAGATGGT GGCCGACAAC
CCCGCACTCG CGGAGGCGAT TCCGATGATG ATCCCGATGG GACGGATGGG TGACCCGGAA
GACGACATCG CCCCCGTGGT CGCCTTTCTG GCCAGCGAGG AAGCCCGCTT CATCACCGGG
GCCACGATTC CGGTCGACGG TGGCCTGCAT GTGCCGAGGT TGAACACCCG GCCGCCGGAT
CCCTCGGTGT TCGACTCACC GCCCGCCAGT CCCGGGCAAT GA
|
|---|
| Protein sequence | MSRLGGKVAV VTGAGKGIGR GIARRFAREG AKVIAAELDR DAGKQVVEDI GELGGEGLFV
QTDVSRKTDI EGAITAAQES FGGLDILVNN AIALTPDVPL EYKTDEMLEQ TMKVGLWSVW
WGMQTAFPLM KARGGGRIIN FYSIDADNGN WVHGDYNTAK GGVQALTRTA GFQWARHNIC
VNAIAPIAAS AAFEQMVADN PALAEAIPMM IPMGRMGDPE DDIAPVVAFL ASEEARFITG
ATIPVDGGLH VPRLNTRPPD PSVFDSPPAS PGQ
|
|---|
| |