Gene Elen_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2515 
Symbol 
ID8416839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2942734 
End bp2943501 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID645025496 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003182859 
Protein GI257792253 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGG GCTTGAAGGA CAAGGTGGTG CTGATCACCG GCGGTGGCGG CGGTATCGCT 
CGGGGTATCG AGCGCGCATT CGCCACCGAG GGTGCGAAGT TCATCCTCAC CGACCTGTTC
CCCGGCGGTC TGGAAGCGGC GAAGGAGGAG CTTGAGCGCG ATTTCGGCTC CGAAGTGTTC
ACGATTCTCG CGAACGGATC GGTGGAAGAG GAGGTGCGTG CGGCGGTCGA AGCGGGCGCC
GAGCACTTCG GCGGGCGCAT CGACGTCCTG ATCAACAACG CGCAGGCGTC GGCGTCGGGA
TTGACGCTGG TGCAGCATTC GGAGGAGGAC TTCGACCTGG CGGTTCGATC CGGCCTGTAC
GCGACGTTCT TCTACATGAA GCATGCCTAC CCTTACCTGA AGGAGACGGC GGGATCCGTC
ATCAACTTCG CTTCCGGCGC GGGCATCGGC GGCAATCCAG GACAGAGCTC CTACGCTGCG
GCGAAAGAGG GCATCCGAGG CATGAGCCGC GTGGCCGCAT CGGAGTGGGG CCCCGACAAC
ATCAACGTGA ACATCGTATG CCCTATCGTC ATGACGAAGG CGCTCGAGGA ATGGCGCGAG
CGCGAGCCCG AGATGTACGA GAAGAACGTG AAGGCGATCC CGCTCGGACG CTTCGGCGAC
GCGGAGAAGG ACGTAGGACG CGTGTGCGTG TTCCTGGCCA GTCCCGATGC CTCGTTCGTA
ACGGGCGACA CCATCATGGT GCAGGGCGGT TCCGGCATGA AGCCGTAA
 
Protein sequence
MDMGLKDKVV LITGGGGGIA RGIERAFATE GAKFILTDLF PGGLEAAKEE LERDFGSEVF 
TILANGSVEE EVRAAVEAGA EHFGGRIDVL INNAQASASG LTLVQHSEED FDLAVRSGLY
ATFFYMKHAY PYLKETAGSV INFASGAGIG GNPGQSSYAA AKEGIRGMSR VAASEWGPDN
INVNIVCPIV MTKALEEWRE REPEMYEKNV KAIPLGRFGD AEKDVGRVCV FLASPDASFV
TGDTIMVQGG SGMKP