| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3716 |
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| Symbol | |
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| ID | 5077864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 353511 |
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| End bp | 354311 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640481439 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001166101 |
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| Protein GI | 146275941 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0314818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGCA ACAGGCTCGA TAACCGCGCG GCAGTCGTCA CTGGTGCGGC GGACGGGATC
GGCGAAGGCA TCGCCCGCCG CTTCGCCGCC GAGGGCGCGG CCGTCGTCGT CGCCGACTAT
GACGACGAAC GCGGTCCCGC CGTGGCGCGC GACTTGCGCG GGCTTGGCGC ACGGGCGGAG
TTCATTCGCT GCGACGTCAG CCGGCGCGAG GACGTGATCG GTGCGGTCGA TCTTTGCGTC
GAGCGCTTCG GCTCCGTCGA TATCCTCGTC AACAATGCCT ATCGCGGCGA AGGCCCGGTG
CGGATCGAGA AGAAGACCGA CGAGCGTTTC GACGAGGCGC TCAGGATGTG CCTCTTCGCC
ACCAAGTGGG CGATGGAGCG CGCGCTGCCG CACATGAAGG CGAAAGGCTG GGGCAGGGTG
ATCAACATGG CCTCGCTCAA CGGCGTAAAC GCGCACATGG GCAGCGCCGA CTACAATGTC
GCCAAGGAGG CCGTCCGCGC CTATTCGCGC ACCGCCGCGC GCGAGTGGGC GCCATATGGC
ATCTGCGTCA ACGTGATCTG CCCGGCTGCG GTCTCGGCGG CCTATCGCCG GTTCGCGGAA
ATGGCGCCCC AGGTCGCCGC GGCAACCGCC GCAGCCAACC CGATGGGCCG CATGGGCGAT
CCGGAAAGCG ATATCGGCGG CGTCGCCGCC TTCCTCGCCA GCGAAGACGC GCGCTACCTG
ACTGGCAACA CGCTCTTCGT CGATGGCGGC GGGCACATCA ACGGCGTGCC GTGGGTGCCG
GATTTCGGCC CCGAGGACTG A
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| Protein sequence | MTGNRLDNRA AVVTGAADGI GEGIARRFAA EGAAVVVADY DDERGPAVAR DLRGLGARAE
FIRCDVSRRE DVIGAVDLCV ERFGSVDILV NNAYRGEGPV RIEKKTDERF DEALRMCLFA
TKWAMERALP HMKAKGWGRV INMASLNGVN AHMGSADYNV AKEAVRAYSR TAAREWAPYG
ICVNVICPAA VSAAYRRFAE MAPQVAAATA AANPMGRMGD PESDIGGVAA FLASEDARYL
TGNTLFVDGG GHINGVPWVP DFGPED
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