| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4971 |
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| Symbol | |
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| ID | 4648299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 5317764 |
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| End bp | 5318552 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639808442 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_955749 |
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| Protein GI | 120405920 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.143414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTGG AACAGTTCAA CCTTGACGGA CAGGTCGCTG TCGTGACCGG CGCAGGCAAG
GGGGTCGGGC AGGGAATCGC GCGTGTCCTG GCAGAGGCGG GAGCGACGGT CGTCGGGACG
GCGCGCACGG AATCCGACAT CGTCGCAACG ATCGCGGCGA TCGAGAGAGC CGGCGGAAAG
GGACTGGCGC TGGTCGCCGA CGCGATGAGC CGGGCCGACG GTGAGCGTGT GGTGGCCACC
GCGGTGGAGC GGTTCGGCCG GATCGACATC CTCGTCAACA ACGTCGGCGG CTCGACCTAC
GCCCGGTTCC TCGACATCAC CGACGACGAC TTCAGGCATA CGTTCGACTG GTGTGTCACC
TCGGCGTTCA TCATGAGCCA GCTGGCGGCG CCGCACATGC TGGAGGCGGG CCGGGGGTCG
ATCATCAACA TCTCGTCGGG TTCGGCCCGT TTCGGGATCC GTGCGCTGAC GGCCTACTGC
GTGGCCAAGG GCGGGCTGGA GGCGCTGACC CGCGCGATGG CCCAGGAGCT GGCGCCGAAG
ATCCGGGTGA ATGCCATCGC GCTCGGATCG TTCGCGACCG AAGGTTTACA AGGCAGCCTT
GACTTGTTAC CTGGGTCGCT GGAGAAGATG AAGGAGGCGA CGCCCCTGCA TCGCCTCGGC
GACGTGGAGG ACCTCGGGAG GTTGTGCGTG TACCTTGCCA CCCGCGACTG CTACGCCACG
AACTCGATCT TCCATGTGGA TGGCGGTATC GATTCGAACA ACTCACCGCT GCCGATCCCC
GATTACTGA
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| Protein sequence | MALEQFNLDG QVAVVTGAGK GVGQGIARVL AEAGATVVGT ARTESDIVAT IAAIERAGGK
GLALVADAMS RADGERVVAT AVERFGRIDI LVNNVGGSTY ARFLDITDDD FRHTFDWCVT
SAFIMSQLAA PHMLEAGRGS IINISSGSAR FGIRALTAYC VAKGGLEALT RAMAQELAPK
IRVNAIALGS FATEGLQGSL DLLPGSLEKM KEATPLHRLG DVEDLGRLCV YLATRDCYAT
NSIFHVDGGI DSNNSPLPIP DY
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