| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0026 |
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| Symbol | |
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| ID | 5774186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 21522 |
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| End bp | 22331 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641315643 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001581364 |
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| Protein GI | 161527538 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATATT TTATTCCTAT TTTAAAAAAA TCGATCTATA AATTACGAAT TTTTTTGTTA
AAGATATTGA GTTTATCAGG AAAAGTAGCT CTAGTAACTG GTGGAAGTAG GGGCATCGGA
TTTGCTACTG CAAAGGTTTT GTCAGAAAAT GGAGCTAATG TAGCAATTAC CGGGAAAGTT
CAGGAGCGGT TAGAAAAAGT ATCTTCTGAA ATTTCTAATT CATTTGCAAT TGTAGCTGAT
GTAAGAAAAA CAGAGGATGT AAAAAATGCA ATAAAAAAAA TCGTTGAAAA ATTTGGCAGA
TTGGACATTC TTGTAAACAA TGCAGGAGTT TTCCCAAAAA TAAAAAAATT ACATGAAATT
GATGATGAAG AATGGAATGA AGTTTTAGAT GTAAATCTTA CAGGACAGTT TAGAGTTACT
AAAGAAGCAA TTCCTCATTT ACAAAAAACA TCAGGTTCAA TAATTAATAT TTCATCAGAT
GCAGGACTAA AAGCATATCA AGGATTTAAT GCAGATGCAT ATTCTGCAAC AAAAGCAGCA
CTTATTGTAC TCACAAAATG TTGGGCACTT GAATATTCTA AAGATAAAAT CAGAGTTAAT
TGTATTTGTC CAGGAGTAGT AGATACTGAT ATGACAAAAC CATTTGTGAA AACCCAAAAA
GATAGAGATT TCATGAATGC AGAGCACCCA TTAGGAAGAA TAGGTGAACC TGAAGAAGTG
GCAAAAGCTG TACTATATTT TGCCTCAGAT GATGCAGCAT GGACTACAGG TGCAATTTTA
GCAGTAGATG GGGGAGAATC AACTAAGTAA
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| Protein sequence | MKYFIPILKK SIYKLRIFLL KILSLSGKVA LVTGGSRGIG FATAKVLSEN GANVAITGKV
QERLEKVSSE ISNSFAIVAD VRKTEDVKNA IKKIVEKFGR LDILVNNAGV FPKIKKLHEI
DDEEWNEVLD VNLTGQFRVT KEAIPHLQKT SGSIINISSD AGLKAYQGFN ADAYSATKAA
LIVLTKCWAL EYSKDKIRVN CICPGVVDTD MTKPFVKTQK DRDFMNAEHP LGRIGEPEEV
AKAVLYFASD DAAWTTGAIL AVDGGESTK
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