Gene BBta_0919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0919 
Symbol 
ID5150600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp951987 
End bp952760 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content63% 
IMG OID640555914 
Productputative oxidoreductase 
Protein accessionYP_001237082 
Protein GI148252497 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.902502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.888241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTCG AAAAATTCAA ACTCGACGGC AAGACCGCGT TGATCACCGG CGGCGCGCAG 
GGCATTGGGC TGGCCTGCGT CGAGGCGCTG GCCGAAGCGG GCGCGCATGT GGTGATCGCC
GATCGCGATG CGAAAGCCGC GGCGGATGCG CAGGCGGCGA TGAAGGCCAG GGGTTTCGAC
ACCGCGACGG CGCTGATGGA CGTGACCAAT TCTGCCCAGG TGACGCAGAT CGCCGACGAT
CTGGCCGCGC GCCACGGCAA GGTCGATATC CTCGTCAACA ATGCCGGCAT CGCGCGCAGC
GAGACGCCGG CCGAGACCGT CACCGACGAG CATTGGCTGA ACGTGCTCGA TGTCAATCTC
AATGGCACGT TCTGGTGCTG CCGCGCCTTC GGCAAGCACA TGCTGGCGGC CAAGAGCGGC
ACGATCGTCA ATATCGGCTC GATGTCCGGC TTCATCGTCA ACAAGCCGCA GGAGCAATGC
TTCTACAACG CATCGAAGGC CGCGGTGCAC CATCTGACCA AGTCGCTGGC GGCCGAATGG
GGCGCCCGCG GCATCCGCGT CAATGCGGTC GCACCGACCT ATATCGAGAC GCCCCTGAAT
GCCTTCGTGA AGAACAATCC GCGCATGTAT GATGCCTGGA TTGGTGGGAC CCCGATGGGC
CGCATGGGCC AGGTCGAGGA GATCGCCTCG GTCGTGCTGT TCCTGGCTTC GGAAGCTGCA
AGTTTGATGA CCGGCAGCGT CGTCGTTGTC GATGGCGGCT ATACTTGCTG GTAA
 
Protein sequence
MYLEKFKLDG KTALITGGAQ GIGLACVEAL AEAGAHVVIA DRDAKAAADA QAAMKARGFD 
TATALMDVTN SAQVTQIADD LAARHGKVDI LVNNAGIARS ETPAETVTDE HWLNVLDVNL
NGTFWCCRAF GKHMLAAKSG TIVNIGSMSG FIVNKPQEQC FYNASKAAVH HLTKSLAAEW
GARGIRVNAV APTYIETPLN AFVKNNPRMY DAWIGGTPMG RMGQVEEIAS VVLFLASEAA
SLMTGSVVVV DGGYTCW