Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2264 |
Symbol | |
ID | 3909048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2612501 |
End bp | 2613268 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637884160 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_485880 |
Protein GI | 86749384 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.136651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTGT TCGACCTGAG CGGAAAAGTC GCTGTGATCA CCGGATCGTC GCGAGGCATC GGCAAGGCGA TCGCCGAGCG GATGGCCGAG CACGGCGCCA AGGTGGTGAT CTCGTCGCGC AAGCAGGACG CCTGTGACGC CGTTGCCAAG TCGATCAATG ATGCGCGCGG GGCAGGGACG GCACTGGCGA TCGCCGCCAA TATTTCCAGC AAGACCGACC TGGAGCGCCT CGCCAACGAA GCGACCGCGG CGTTCGGCAA GATCGACGCG CTGGTCTGCA ACGCCGCGTC GAATCCGTAT TACGGCCCGC AGTCGGGCAT CAGCGACGAT CAGTTCAGGA AGATTCTGGA CAACAACATC GTCGCCAATC ACTGGCTGAT CAGCGCCGTT GCGCCGCAGA TGATCGCCCG CAAGGACGGT TCGATCACCA TCGTCTCGTC GATCGGCGGC CTGAAGGGCT CGACCGTGAT CGGCGCCTAC TGCATCTCCA AGGCCGCCGA CATGCAGCTG GCGCGCAACC TCGCCTGCGA ATATGGCGAG CACAATATCC GCGTGAACTG CATCGCGCCG GGCTTGATCA AGACCGATTT CGCCCGCGCG CTGTGGGAAA ACCCCGAGAC GCTGAAAGCC TCGACCGCGC GCTCGCCGCT GCAGCGGATC GGCGAGCCAG ACGAAATCGC CGGCGCCGCT GTGTTCCTCG CCTCCGCCGC GGGCAGCTTC ACGACGGGGC AGACGCTGGT GATCGACGGC GGCGCGACGA TCAGCTGA
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Protein sequence | MSLFDLSGKV AVITGSSRGI GKAIAERMAE HGAKVVISSR KQDACDAVAK SINDARGAGT ALAIAANISS KTDLERLANE ATAAFGKIDA LVCNAASNPY YGPQSGISDD QFRKILDNNI VANHWLISAV APQMIARKDG SITIVSSIGG LKGSTVIGAY CISKAADMQL ARNLACEYGE HNIRVNCIAP GLIKTDFARA LWENPETLKA STARSPLQRI GEPDEIAGAA VFLASAAGSF TTGQTLVIDG GATIS
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