| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6198 |
|---|
| Symbol | |
|---|
| ID | 8729981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 7511745 |
|---|
| End bp | 7512527 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003390956 |
|---|
| Protein GI | 284041026 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCA ACAGCCAATC GGCTAATTTA TCTGTCTTTT CGCTCGATGG AAAGCTTGCC
CTGATTACCG GTGGCGGTAG TGGTATTGGC CTCGATATTG CCCGTTGCAT GGTGCAGGCA
GGCGGGCGGG TCGTTATCAC TGGTCGGCGG GAGCAGCCCT TGCAGGAGGC CGTCGCCACG
TTGGGCGAGA GGGCGCATTA TATGGTCAAC GACGTAACCG ATCGGCCGTT GCTGGATAAC
CTCGTTGAGC AGATAGAAGC CGCTTATGGC CCTATTGATA CGCTGGTCAA TAACGCTGGT
ATCAACATGA AAAAACCGGC GCTCGAAGTC ACGGACGAAG ATTTTGACCG GATTGTTCAC
ACAAACCTCA ACTCGGTCTT TAGCCTCACG CGGGCCTGTG CCAAACGGAT GATGGCGCGG
CAGAGCGGGT CGATCATCAT GATCTCGTCG ATGGCGGCCT ATTATGGCAT CGACCGGGTA
GCGGCTTATG CGGCCTCAAA ATCGGGGGTA GAAGGCATGG TAAAAGTGCT GGCGTCGGAG
TTTTCGGGCA ACGGCGTTCG GGTCAATGCC ATTGCGCCGG GCTTCATCGA AACGGCCATG
AGTAAAACGG CGATGGGGGG CGACCCCGAC CGTTTCGCCC GCGCCATGCG CCGGACCCCA
ATGGGTAAGT TCGGTCAGCC CGAAGATATT GGCTGGGCGG CCGTTTTCCT CGCGTCCGAA
GCGGCCAAGT ATATCACCGG GGCTTCGCTG CCAGTCGATG GGGGTAATTC GATTGGGTTT
TGA
|
|---|
| Protein sequence | MQTNSQSANL SVFSLDGKLA LITGGGSGIG LDIARCMVQA GGRVVITGRR EQPLQEAVAT
LGERAHYMVN DVTDRPLLDN LVEQIEAAYG PIDTLVNNAG INMKKPALEV TDEDFDRIVH
TNLNSVFSLT RACAKRMMAR QSGSIIMISS MAAYYGIDRV AAYAASKSGV EGMVKVLASE
FSGNGVRVNA IAPGFIETAM SKTAMGGDPD RFARAMRRTP MGKFGQPEDI GWAAVFLASE
AAKYITGASL PVDGGNSIGF
|
|---|
| |