More than 300 homologs were found in PanDaTox collection
for query gene PMT9312_0248 on replicon NC_007577
Organism: Prochlorococcus marinus str. MIT 9312



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007577  PMT9312_0248  Crp/FNR family transcriptional regulator  100 
 
 
244 aa  487  1e-137  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_02691  CRP family global nitrogen regulatory protein  95.9 
 
 
244 aa  452  1.0000000000000001e-126  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_02681  CRP family global nitrogen regulatory protein  96.31 
 
 
244 aa  453  1.0000000000000001e-126  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.548193  n/a   
 
 
-
 
NC_008817  P9515_02791  CRP family global nitrogen regulatory protein  91.39 
 
 
244 aa  430  1e-120  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.696842  n/a   
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  80.5 
 
 
238 aa  384  1e-106  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  79.1 
 
 
243 aa  372  1e-102  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  88.57 
 
 
210 aa  372  1e-102  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  79.51 
 
 
243 aa  372  1e-102  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_24561  CRP family global nitrogen regulatory protein  87.5 
 
 
222 aa  362  3e-99  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009976  P9211_02711  global nitrogen regulatory protein  79.1 
 
 
244 aa  342  2.9999999999999997e-93  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  66.51 
 
 
221 aa  301  5.000000000000001e-81  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  64.81 
 
 
223 aa  300  1e-80  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  65.91 
 
 
225 aa  300  1e-80  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  65.91 
 
 
225 aa  300  1e-80  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  69.7 
 
 
223 aa  296  2e-79  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  65.6 
 
 
225 aa  296  2e-79  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  69.7 
 
 
223 aa  295  3e-79  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  71.21 
 
 
222 aa  295  3e-79  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  32.54 
 
 
234 aa  119  3.9999999999999996e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  31.41 
 
 
225 aa  103  3e-21  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  29.19 
 
 
231 aa  98.2  1e-19  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  29.63 
 
 
229 aa  96.3  4e-19  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  32.12 
 
 
232 aa  95.1  9e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1146  CRP/FNR family transcriptional regulator  31.33 
 
 
211 aa  94.4  2e-18  Synechococcus sp. CC9605  Bacteria  normal  0.242619  normal 
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  28.43 
 
 
229 aa  93.6  3e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  28.65 
 
 
242 aa  91.7  9e-18  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  25.99 
 
 
239 aa  88.6  9e-17  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  29.17 
 
 
222 aa  87.4  2e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  25.67 
 
 
230 aa  87.4  2e-16  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  27.27 
 
 
224 aa  87.4  2e-16  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  28.36 
 
 
226 aa  85.5  6e-16  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  24.19 
 
 
225 aa  85.9  6e-16  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  25.63 
 
 
226 aa  85.1  0.000000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  26.06 
 
 
228 aa  84.3  0.000000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  25.41 
 
 
254 aa  83.6  0.000000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  27.81 
 
 
223 aa  83.6  0.000000000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  27.18 
 
 
227 aa  83.2  0.000000000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  27.62 
 
 
230 aa  83.2  0.000000000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  30.73 
 
 
235 aa  83.2  0.000000000000004  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_011884  Cyan7425_0207  transcriptional regulator, Crp/Fnr family  30.77 
 
 
218 aa  82.4  0.000000000000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.163925 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  25.25 
 
 
226 aa  82.4  0.000000000000005  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  26.7 
 
 
231 aa  82.4  0.000000000000007  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  26.7 
 
 
231 aa  82.4  0.000000000000007  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  30.73 
 
 
237 aa  82  0.000000000000007  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  26.04 
 
 
228 aa  82  0.000000000000008  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  26.92 
 
 
236 aa  82  0.000000000000008  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  24.47 
 
 
236 aa  82  0.000000000000008  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  29.36 
 
 
226 aa  82  0.000000000000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  26.18 
 
 
236 aa  81.6  0.000000000000009  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_011831  Cagg_1896  cyclic nucleotide-binding protein  27.89 
 
 
218 aa  81.6  0.00000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  23.94 
 
 
236 aa  81.3  0.00000000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  27.78 
 
 
224 aa  81.3  0.00000000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  24.12 
 
 
240 aa  80.5  0.00000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3232  cyclic nucleotide-binding protein  30.18 
 
 
212 aa  80.9  0.00000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  27.09 
 
 
225 aa  80.5  0.00000000000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  25.35 
 
 
236 aa  80.1  0.00000000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  29.21 
 
 
240 aa  80.1  0.00000000000003  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_008025  Dgeo_1275  Crp/FNR family transcriptional regulator  30.11 
 
 
230 aa  80.1  0.00000000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.651323 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  26.79 
 
 
225 aa  80.1  0.00000000000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  27.6 
 
 
228 aa  79.7  0.00000000000004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2356  Crp/FNR family transcriptional regulator  30.29 
 
 
208 aa  79.3  0.00000000000004  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  24.62 
 
 
227 aa  79.7  0.00000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0426  Crp/Fnr family transcriptional regulator  28.04 
 
 
202 aa  79.3  0.00000000000005  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86211 
 
 
-
 
NC_008148  Rxyl_1332  Crp/FNR family transcriptional regulator  31.02 
 
 
238 aa  79.3  0.00000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.407818  n/a   
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  26.2 
 
 
230 aa  79.3  0.00000000000005  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  30.16 
 
 
219 aa  79.3  0.00000000000005  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  27.57 
 
 
228 aa  79  0.00000000000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  25.67 
 
 
230 aa  79  0.00000000000007  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  25.89 
 
 
231 aa  79  0.00000000000007  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  26.56 
 
 
231 aa  78.6  0.00000000000008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2491  Crp/FNR family transcriptional regulator  29.24 
 
 
393 aa  78.2  0.0000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.116073 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  25.95 
 
 
226 aa  77.8  0.0000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_013216  Dtox_2928  transcriptional regulator, Crp/Fnr family  25.65 
 
 
232 aa  78.2  0.0000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.39759 
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  26.2 
 
 
217 aa  77  0.0000000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  25.67 
 
 
230 aa  77  0.0000000000003  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  28.65 
 
 
225 aa  76.6  0.0000000000003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  27.4 
 
 
225 aa  76.3  0.0000000000004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  26.63 
 
 
226 aa  75.9  0.0000000000005  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  24.48 
 
 
225 aa  75.9  0.0000000000006  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  27.18 
 
 
238 aa  75.9  0.0000000000006  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_009523  RoseRS_0244  CRP/FNR family transcriptional regulator  28.11 
 
 
228 aa  75.5  0.0000000000008  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0431251 
 
 
-
 
NC_012918  GM21_2448  transcriptional regulator, Crp/Fnr family  27.19 
 
 
238 aa  75.5  0.0000000000008  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  25.13 
 
 
230 aa  75.1  0.0000000000009  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  29.24 
 
 
251 aa  75.1  0.000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  25.13 
 
 
230 aa  74.7  0.000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  25.13 
 
 
230 aa  74.7  0.000000000001  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  25.13 
 
 
226 aa  75.1  0.000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  26.42 
 
 
225 aa  75.1  0.000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_009767  Rcas_0291  Crp/FNR family transcriptional regulator  26.19 
 
 
227 aa  74.7  0.000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.277011  normal 
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  25.12 
 
 
224 aa  74.3  0.000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  24.53 
 
 
220 aa  74.7  0.000000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_011773  BCAH820_2165  transcriptional regulator, Crp/Fnr family  25.13 
 
 
230 aa  74.7  0.000000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  25.52 
 
 
225 aa  73.9  0.000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  25.26 
 
 
232 aa  73.9  0.000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_007413  Ava_0463  Crp/FNR family transcriptional regulator  31.58 
 
 
197 aa  73.9  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.778777  normal  0.174596 
 
 
-
 
NC_009485  BBta_4881  putative cyclic-AMP receptor-like protein  27.96 
 
 
281 aa  73.9  0.000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal  0.139273 
 
 
-
 
NC_011725  BCB4264_A0424  transcriptional regulator, Crp family  26.5 
 
 
229 aa  73.6  0.000000000003  Bacillus cereus B4264  Bacteria  hitchhiker  0.00556747  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  24.65 
 
 
224 aa  73.6  0.000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  24.49 
 
 
225 aa  73.6  0.000000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  26.64 
 
 
224 aa  73.2  0.000000000004  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
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