Gene PMT9312_0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0248 
Symbol 
ID3765034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp239315 
End bp240049 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content36% 
IMG OID637796755 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_396745 
Protein GI78778633 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACCTT CTTCTCGAGG ATTCAGTCGC TTTAATTCGC AACAATCCGG ACAAAGTAAG 
ATTAACTCTG TTGGAGAACG TTTTCCAATT AATAGAACTT TAATGGAAGT AATTAGAGGT
CTAGAGGGTG CAAGCACAGA AATGGTTGAG AGATCTAAAA CAATATTTTT CCCTGGGGAT
CCTGCCGAGA GGGTTTATTT GATAAGGAGA GGAGCAGTAA GATTGTCAAG AGTTTATGAA
TCAGGTGAAG AGATAACTGT TGCTCTATTA AGAGAAAATA GTCTCTTTGG TGTTTTATCT
CTTCTAACAG GCCATAGATC TGATCGTTTT TATCATTCCA TAGCATTCAC AAGAGTTGAA
ATGATAACAG CACCTGCGAA TTCTGTTTTA AGAGCAATAG AGGAAGATGC ATCAGTTGGA
CTATTATTGT TGCAGGGTCT TTCAAGTAGG ATCTTACAAA CAGAAACAAT GATAGAAACT
CTTACTCACA GAGATATGTC TTCACGTTTA GTAAGTTTTT TAATGGTTCT TTGTAGAGAC
TTTGGAGTCG CAAGTGAAAA AGGTATTACA ATAGATTTAA GACTTTCACA TCAAGCTATT
GCTGAAGCTA TTGGTTCAAC AAGAGTAACG ATTACAAGAT TATTAGGCGA TTTAAAGGAT
TCTGGGCTCC TTAATATTGA AAGAAAAAAG ATTACAGTAT TTGATCCAAT CGCTCTTTCA
AAAAGATTTA ATTGA
 
Protein sequence
MIPSSRGFSR FNSQQSGQSK INSVGERFPI NRTLMEVIRG LEGASTEMVE RSKTIFFPGD 
PAERVYLIRR GAVRLSRVYE SGEEITVALL RENSLFGVLS LLTGHRSDRF YHSIAFTRVE
MITAPANSVL RAIEEDASVG LLLLQGLSSR ILQTETMIET LTHRDMSSRL VSFLMVLCRD
FGVASEKGIT IDLRLSHQAI AEAIGSTRVT ITRLLGDLKD SGLLNIERKK ITVFDPIALS
KRFN