More than 300 homologs were found in PanDaTox collection
for query gene Mpop_4860 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010725  Mpop_4860  two component transcriptional regulator, LuxR family  100 
 
 		 236 aa  465  9.999999999999999e-131  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.142587 
 
 
-
 
NC_010172  Mext_4343  response regulator receiver  88.56 
 
 		 236 aa  422  1e-117  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_4712  two component transcriptional regulator, LuxR family  88.56 
 
 		 236 aa  422  1e-117  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.37561  normal  1 
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  47.09 
 
 		 223 aa  189  2.9999999999999997e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  47.75 
 
 		 222 aa  186  3e-46  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  44.91 
 
 		 220 aa  177  2e-43  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  44.65 
 
 		 221 aa  172  2.9999999999999996e-42  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  44.69 
 
 		 223 aa  171  9e-42  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007778  RPB_4035  two component LuxR family transcriptional regulator  44.14 
 
 		 228 aa  166  2.9999999999999998e-40  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_3789  response regulator receiver  44.55 
 
 		 228 aa  166  4e-40  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0916709 
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  44.09 
 
 		 228 aa  164  9e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0851  two component transcriptional regulator, LuxR family  40.91 
 
 		 232 aa  159  2e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_3079  two component LuxR family transcriptional regulator  43.38 
 
 		 233 aa  159  2e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_0347  two component transcriptional regulator, LuxR family  39.73 
 
 		 222 aa  159  3e-38  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_1668  response regulator receiver  39.73 
 
 		 222 aa  159  5e-38  Methylobacterium extorquens PA1  Bacteria  normal  0.679138  normal  1 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  43.19 
 
 		 213 aa  157  1e-37  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_1985  two component transcriptional regulator, LuxR family  39.91 
 
 		 222 aa  157  1e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  42.99 
 
 		 218 aa  157  2e-37  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  38.43 
 
 		 215 aa  156  2e-37  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  42.53 
 
 		 218 aa  157  2e-37  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  42.53 
 
 		 218 aa  157  2e-37  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_007925  RPC_3790  two component LuxR family transcriptional regulator  38.84 
 
 		 226 aa  154  8e-37  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4449  two component LuxR family transcriptional regulator  41.33 
 
 		 230 aa  153  2.9999999999999998e-36  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.683214 
 
 
-
 
NC_007958  RPD_2401  response regulator receiver  39.65 
 
 		 230 aa  150  2e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0808908 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  37.96 
 
 		 212 aa  148  8e-35  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  40.36 
 
 		 218 aa  147  1.0000000000000001e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  39.72 
 
 		 213 aa  147  2.0000000000000003e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  41.35 
 
 		 212 aa  146  3e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  36.92 
 
 		 217 aa  145  4.0000000000000006e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  38.53 
 
 		 214 aa  140  9.999999999999999e-33  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_011004  Rpal_3423  two component transcriptional regulator, LuxR family  38.25 
 
 		 235 aa  140  1.9999999999999998e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.324081  n/a   
 
 
-
 
NC_014148  Plim_3764  response regulator receiver  37.67 
 
 		 217 aa  140  1.9999999999999998e-32  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.321181  n/a   
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  35.98 
 
 		 218 aa  139  3e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  38.03 
 
 		 206 aa  138  7.999999999999999e-32  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  36.32 
 
 		 206 aa  138  8.999999999999999e-32  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  36.7 
 
 		 219 aa  138  8.999999999999999e-32  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  37.81 
 
 		 219 aa  137  2e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  37.33 
 
 		 216 aa  136  3.0000000000000003e-31  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  33.33 
 
 		 223 aa  135  4e-31  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  36.79 
 
 		 216 aa  135  5e-31  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  34.43 
 
 		 206 aa  135  5e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  38.86 
 
 		 216 aa  135  5e-31  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  38.86 
 
 		 216 aa  135  6.0000000000000005e-31  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_013739  Cwoe_4976  two component transcriptional regulator, LuxR family  41.86 
 
 		 218 aa  135  8e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.289575  normal  0.034027 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  37.22 
 
 		 226 aa  134  9e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  33.33 
 
 		 219 aa  134  9.999999999999999e-31  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  37.16 
 
 		 232 aa  133  1.9999999999999998e-30  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  36.82 
 
 		 232 aa  133  3e-30  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_3163  two component LuxR family transcriptional regulator  39.44 
 
 		 203 aa  132  3.9999999999999996e-30  Pelobacter propionicus DSM 2379  Bacteria  normal  0.932633  n/a   
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  37.44 
 
 		 215 aa  132  5e-30  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  37.24 
 
 		 243 aa  132  6e-30  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  32.41 
 
 		 219 aa  131  7.999999999999999e-30  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  32.87 
 
 		 219 aa  131  1.0000000000000001e-29  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  35.32 
 
 		 215 aa  131  1.0000000000000001e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  37.39 
 
 		 224 aa  131  1.0000000000000001e-29  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  39.25 
 
 		 217 aa  131  1.0000000000000001e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  38.89 
 
 		 220 aa  131  1.0000000000000001e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  36.73 
 
 		 224 aa  130  2.0000000000000002e-29  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  33.96 
 
 		 217 aa  130  2.0000000000000002e-29  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  36.11 
 
 		 215 aa  129  3e-29  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  38.6 
 
 		 221 aa  129  3e-29  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  37.9 
 
 		 214 aa  129  3e-29  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  36.62 
 
 		 216 aa  129  3e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  36.7 
 
 		 215 aa  129  4.0000000000000003e-29  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  38.46 
 
 		 228 aa  129  4.0000000000000003e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  37.56 
 
 		 215 aa  129  4.0000000000000003e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  35.65 
 
 		 232 aa  129  4.0000000000000003e-29  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  30.63 
 
 		 229 aa  129  5.0000000000000004e-29  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_010644  Emin_1197  two component LuxR family transcriptional regulator  33.48 
 
 		 225 aa  129  5.0000000000000004e-29  Elusimicrobium minutum Pei191  Bacteria  normal  1  normal  0.0485473 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  35.35 
 
 		 214 aa  128  7.000000000000001e-29  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_0083  two component LuxR family transcriptional regulator  36.65 
 
 		 210 aa  128  7.000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  35.21 
 
 		 214 aa  127  1.0000000000000001e-28  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  32.39 
 
 		 219 aa  127  1.0000000000000001e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  37.34 
 
 		 231 aa  127  2.0000000000000002e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  32.06 
 
 		 221 aa  127  2.0000000000000002e-28  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  35.05 
 
 		 215 aa  127  2.0000000000000002e-28  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  35.19 
 
 		 213 aa  126  2.0000000000000002e-28  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_013411  GYMC61_2911  two component transcriptional regulator, LuxR family  33.97 
 
 		 209 aa  127  2.0000000000000002e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  39.09 
 
 		 234 aa  126  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  32.55 
 
 		 218 aa  126  3e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  36.32 
 
 		 242 aa  126  3e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  37.38 
 
 		 217 aa  125  4.0000000000000003e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_010814  Glov_1561  two component transcriptional regulator, LuxR family  36.32 
 
 		 199 aa  126  4.0000000000000003e-28  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  37.14 
 
 		 215 aa  125  4.0000000000000003e-28  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal  1 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  38.91 
 
 		 224 aa  125  5e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  34.93 
 
 		 226 aa  125  5e-28  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  38.64 
 
 		 234 aa  125  6e-28  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  40.69 
 
 		 211 aa  125  6e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  36.79 
 
 		 215 aa  125  7e-28  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  37.33 
 
 		 253 aa  125  7e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  34.42 
 
 		 221 aa  125  8.000000000000001e-28  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  35.91 
 
 		 242 aa  125  8.000000000000001e-28  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  34.84 
 
 		 224 aa  125  8.000000000000001e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  34.86 
 
 		 215 aa  125  8.000000000000001e-28  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.329832 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  33.64 
 
 		 213 aa  125  8.000000000000001e-28  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_009441  Fjoh_4664  two component LuxR family transcriptional regulator  31.34 
 
 		 219 aa  125  8.000000000000001e-28  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  34.86 
 
 		 215 aa  125  8.000000000000001e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  35.78 
 
 		 215 aa  124  9e-28  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  37.85 
 
 		 219 aa  124  9e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  38.25 
 
 		 222 aa  124  9e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
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