212 homologs were found in PanDaTox collection
for query gene Acid345_2437 on replicon NC_008009
Organism: Candidatus Koribacter versatilis Ellin345



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008009  Acid345_2437  cyclic nucleotide-binding protein  100 
 
 
230 aa  474  1e-133  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.391924 
 
 
-
 
NC_008009  Acid345_1422  cyclic nucleotide-binding protein  37.33 
 
 
238 aa  169  4e-41  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.309633  normal  0.119588 
 
 
-
 
NC_008009  Acid345_0657  cyclic nucleotide-binding protein  32.56 
 
 
246 aa  134  9.999999999999999e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.418671  normal  0.417958 
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  24.15 
 
 
230 aa  80.9  0.00000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2941  Crp/FNR family transcriptional regulator  25.12 
 
 
235 aa  80.9  0.00000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0595  CRP/FNR family transcriptional regulator  25.59 
 
 
228 aa  80.5  0.00000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.130469  unclonable  0.00000708114 
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  26.54 
 
 
229 aa  80.1  0.00000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0837  transcriptional regulator, Crp/Fnr family  26.15 
 
 
234 aa  79.7  0.00000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3150  Crp/FNR family transcriptional regulator  26.98 
 
 
252 aa  77  0.0000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3897  Crp/FNR family transcriptional regulator  24.17 
 
 
227 aa  77  0.0000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.280734  normal  0.887061 
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  27.23 
 
 
239 aa  77  0.0000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  23.67 
 
 
230 aa  76.6  0.0000000000003  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  23.67 
 
 
230 aa  76.6  0.0000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  23.67 
 
 
230 aa  76.6  0.0000000000003  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  23.67 
 
 
226 aa  76.6  0.0000000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2165  transcriptional regulator, Crp/Fnr family  23.67 
 
 
230 aa  76.6  0.0000000000003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  25 
 
 
240 aa  75.9  0.0000000000004  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  23.67 
 
 
230 aa  75.5  0.0000000000006  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  23.67 
 
 
230 aa  75.5  0.0000000000007  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  24.64 
 
 
236 aa  74.3  0.000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  23.19 
 
 
230 aa  73.9  0.000000000002  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  22.71 
 
 
230 aa  73.2  0.000000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  27.23 
 
 
236 aa  71.2  0.00000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  25.82 
 
 
236 aa  70.1  0.00000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_008340  Mlg_1070  Crp/FNR family transcriptional regulator  24.65 
 
 
235 aa  68.9  0.00000000006  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.105875  normal 
 
 
-
 
NC_007958  RPD_3066  cyclic nucleotide-binding  25.7 
 
 
240 aa  67.8  0.0000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  25.97 
 
 
231 aa  67.8  0.0000000001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  25.57 
 
 
237 aa  66.2  0.0000000004  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  22.52 
 
 
232 aa  65.5  0.0000000008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  25.64 
 
 
267 aa  64.7  0.000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  22.79 
 
 
236 aa  63.5  0.000000002  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  22.79 
 
 
236 aa  63.9  0.000000002  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  25.54 
 
 
226 aa  63.5  0.000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  24.65 
 
 
231 aa  63.5  0.000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_007794  Saro_2016  Crp/FNR family transcriptional regulator  24.66 
 
 
229 aa  63.2  0.000000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0776172  n/a   
 
 
-
 
NC_010510  Mrad2831_6158  cyclic nucleotide-binding protein  26.58 
 
 
251 aa  61.2  0.00000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  22.79 
 
 
225 aa  60.1  0.00000003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2918  transcriptional regulator, Crp/Fnr family  27.83 
 
 
226 aa  60.1  0.00000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.172063  normal  0.392966 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  22.62 
 
 
225 aa  59.7  0.00000004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  24.23 
 
 
254 aa  59.7  0.00000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_013385  Adeg_1123  transcriptional regulator, Crp/Fnr family  26.67 
 
 
220 aa  59.7  0.00000004  Ammonifex degensii KC4  Bacteria  normal  0.244021  n/a   
 
 
-
 
NC_010571  Oter_2867  Crp/FNR family transcriptional regulator  25.93 
 
 
241 aa  59.3  0.00000005  Opitutus terrae PB90-1  Bacteria  normal  0.343371  normal  0.792405 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  21.23 
 
 
225 aa  59.3  0.00000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  23.21 
 
 
234 aa  59.3  0.00000005  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  28.72 
 
 
230 aa  58.9  0.00000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  24.23 
 
 
254 aa  58.9  0.00000006  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  22.97 
 
 
226 aa  58.5  0.00000007  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_009718  Fnod_1303  CRP/FNR family transcriptional regulator  22.45 
 
 
229 aa  58.5  0.00000007  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  21.66 
 
 
231 aa  58.9  0.00000007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2246  Crp/FNR family transcriptional regulator  22.33 
 
 
233 aa  58.2  0.0000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  26.14 
 
 
228 aa  57.4  0.0000002  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  21.2 
 
 
231 aa  57.4  0.0000002  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2027  transcriptional regulator, Crp/Fnr family  22.95 
 
 
226 aa  57  0.0000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  21.2 
 
 
231 aa  57.4  0.0000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_2417  cyclic nucleotide-binding protein  23.71 
 
 
250 aa  56.2  0.0000004  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.034588  normal  0.0382931 
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  22.16 
 
 
228 aa  55.8  0.0000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  23.3 
 
 
232 aa  55.5  0.0000006  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_008009  Acid345_1498  Crp/FNR family transcriptional regulator  26.4 
 
 
239 aa  55.5  0.0000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163113  normal 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  25.25 
 
 
222 aa  55.5  0.0000008  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_009511  Swit_3029  CRP/FNR family transcriptional regulator  21.72 
 
 
228 aa  55.1  0.0000008  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  24.4 
 
 
254 aa  55.1  0.0000009  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  24.21 
 
 
239 aa  54.3  0.000001  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_007964  Nham_2812  Crp/FNR family transcriptional regulator  22.16 
 
 
243 aa  54.7  0.000001  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  22.28 
 
 
224 aa  53.9  0.000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  19.51 
 
 
236 aa  53.5  0.000002  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0394  transcriptional regulator, Crp/Fnr family  25.77 
 
 
237 aa  53.9  0.000002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  23.79 
 
 
254 aa  53.1  0.000003  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  19.51 
 
 
236 aa  53.1  0.000003  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008699  Noca_1619  cyclic nucleotide-binding  25.77 
 
 
235 aa  53.1  0.000004  Nocardioides sp. JS614  Bacteria  normal  0.146026  n/a   
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  23.96 
 
 
239 aa  52.4  0.000005  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  22.87 
 
 
225 aa  52.4  0.000006  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  22.11 
 
 
232 aa  52.4  0.000006  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1010  CRP/FNR family transcriptional regulator  23.58 
 
 
257 aa  52  0.000008  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  21.2 
 
 
243 aa  51.6  0.000009  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_011757  Mchl_4199  cyclic nucleotide-binding protein  23.66 
 
 
260 aa  52  0.000009  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  20.73 
 
 
231 aa  51.2  0.00001  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_011992  Dtpsy_2689  transcriptional regulator, Crp/Fnr family  25.59 
 
 
246 aa  51.2  0.00001  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0426  Crp/Fnr family transcriptional regulator  25.87 
 
 
202 aa  51.6  0.00001  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86211 
 
 
-
 
NC_011126  HY04AAS1_0349  transcriptional regulator, Crp/Fnr family  18.22 
 
 
219 aa  51.6  0.00001  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000181532  n/a   
 
 
-
 
NC_008782  Ajs_3341  Crp/FNR family transcriptional regulator  25.59 
 
 
221 aa  51.6  0.00001  Acidovorax sp. JS42  Bacteria  normal  normal  0.0836398 
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  23.35 
 
 
235 aa  51.2  0.00001  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_004311  BRA0281  transcriptional regulator NnrR  21.61 
 
 
232 aa  50.8  0.00002  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  19.35 
 
 
352 aa  50.8  0.00002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  21.11 
 
 
233 aa  50.8  0.00002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_011126  HY04AAS1_0644  transcriptional regulator, Crp/Fnr family  20.26 
 
 
243 aa  50.8  0.00002  Hydrogenobaculum sp. Y04AAS1  Bacteria  unclonable  0.0000000000000386152  n/a   
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  24.14 
 
 
231 aa  50.4  0.00002  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  24.88 
 
 
261 aa  50.4  0.00002  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  21.11 
 
 
233 aa  50.8  0.00002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  25 
 
 
226 aa  50.1  0.00003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  19.6 
 
 
227 aa  50.1  0.00003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  22.27 
 
 
227 aa  49.7  0.00003  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0968  CRP/FNR family transcriptional regulator  20.6 
 
 
233 aa  50.1  0.00003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  22.11 
 
 
251 aa  49.3  0.00005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_009953  Sare_0070  cyclic nucleotide-binding protein  23.71 
 
 
227 aa  49.3  0.00005  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.376283 
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  20.85 
 
 
222 aa  48.9  0.00006  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_007954  Sden_3444  cyclic nucleotide-binding  21.84 
 
 
250 aa  48.9  0.00007  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0388  cAMP-regulatory protein  23.9 
 
 
212 aa  48.9  0.00007  Psychromonas ingrahamii 37  Bacteria  normal  0.0189183  normal 
 
 
-
 
NC_011146  Gbem_1802  transcriptional regulator, Crp/Fnr family  21.81 
 
 
238 aa  48.9  0.00007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  22.92 
 
 
232 aa  48.5  0.00008  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0628  transcriptional regulator Dnr  22.56 
 
 
227 aa  48.5  0.00008  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
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