More than 300 homologs were found in PanDaTox collection
for query gene Rxyl_0094 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008148  Rxyl_0094  two component LuxR family transcriptional regulator  100 
 
 		 222 aa  428  1e-119  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1132  two component transcriptional regulator, LuxR family  46.33 
 
 		 214 aa  190  1e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  41.59 
 
 		 223 aa  143  2e-33  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  40.09 
 
 		 234 aa  131  1.0000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  39.72 
 
 		 253 aa  130  1.0000000000000001e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  38.16 
 
 		 213 aa  130  1.0000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal  1 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  39.25 
 
 		 238 aa  130  2.0000000000000002e-29  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_013757  Gobs_3437  two component transcriptional regulator, LuxR family  39.25 
 
 		 248 aa  129  5.0000000000000004e-29  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.39912  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  37.56 
 
 		 242 aa  128  7.000000000000001e-29  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  37.56 
 
 		 221 aa  127  1.0000000000000001e-28  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  36.62 
 
 		 215 aa  127  1.0000000000000001e-28  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  44.02 
 
 		 218 aa  127  1.0000000000000001e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  36.7 
 
 		 213 aa  127  2.0000000000000002e-28  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  38.32 
 
 		 250 aa  126  2.0000000000000002e-28  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  35.81 
 
 		 231 aa  126  3e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  36.63 
 
 		 226 aa  124  8.000000000000001e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  37.67 
 
 		 221 aa  124  1e-27  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_3524  response regulator receiver protein  36.41 
 
 		 214 aa  124  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0390864  normal  1 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  41.12 
 
 		 232 aa  124  1e-27  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.24 
 
 		 226 aa  124  1e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  39.91 
 
 		 218 aa  124  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_014158  Tpau_3507  two component transcriptional regulator, LuxR family  40.09 
 
 		 213 aa  124  2e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.892641  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  38.86 
 
 		 230 aa  123  2e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  38.18 
 
 		 236 aa  123  2e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  37.26 
 
 		 221 aa  123  3e-27  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  37.04 
 
 		 241 aa  123  3e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  42.29 
 
 		 217 aa  123  3e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  35.14 
 
 		 224 aa  122  4e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  37.74 
 
 		 234 aa  122  5e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  35.55 
 
 		 237 aa  121  8e-27  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  35.16 
 
 		 232 aa  120  9.999999999999999e-27  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  35.02 
 
 		 237 aa  120  9.999999999999999e-27  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  35.16 
 
 		 232 aa  121  9.999999999999999e-27  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  38.79 
 
 		 213 aa  121  9.999999999999999e-27  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  35.02 
 
 		 213 aa  120  9.999999999999999e-27  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  37.26 
 
 		 209 aa  120  1.9999999999999998e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  39.44 
 
 		 213 aa  120  1.9999999999999998e-26  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  36.74 
 
 		 225 aa  120  1.9999999999999998e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_008578  Acel_0973  two component LuxR family transcriptional regulator  39.44 
 
 		 216 aa  120  1.9999999999999998e-26  Acidothermus cellulolyticus 11B  Bacteria  normal  0.255067  normal  0.404517 
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  35.16 
 
 		 232 aa  120  1.9999999999999998e-26  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  38.22 
 
 		 218 aa  120  1.9999999999999998e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  37.21 
 
 		 216 aa  119  3e-26  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  36.92 
 
 		 212 aa  119  3e-26  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_009487  SaurJH9_1938  two component LuxR family transcriptional regulator  32.09 
 
 		 209 aa  119  3e-26  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1972  response regulator receiver  32.09 
 
 		 209 aa  119  3e-26  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  40.37 
 
 		 207 aa  119  3.9999999999999996e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.296562 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  32.09 
 
 		 216 aa  119  3.9999999999999996e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  35.07 
 
 		 303 aa  118  6e-26  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  31.63 
 
 		 216 aa  118  7e-26  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  36.45 
 
 		 212 aa  118  7e-26  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.967001 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  36.32 
 
 		 215 aa  118  7e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  35.19 
 
 		 215 aa  118  7.999999999999999e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  39.61 
 
 		 222 aa  117  9e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  37.39 
 
 		 235 aa  118  9e-26  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal  1 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  38.5 
 
 		 226 aa  117  9.999999999999999e-26  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  37.16 
 
 		 214 aa  117  9.999999999999999e-26  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  38.6 
 
 		 223 aa  117  9.999999999999999e-26  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_003296  RSp0980  nitrate/nitrite response regulator transcription regulator protein  35.32 
 
 		 222 aa  116  1.9999999999999998e-25  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  37.33 
 
 		 221 aa  116  1.9999999999999998e-25  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  37.44 
 
 		 231 aa  117  1.9999999999999998e-25  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  36.92 
 
 		 232 aa  116  1.9999999999999998e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  34.88 
 
 		 224 aa  116  1.9999999999999998e-25  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  41.15 
 
 		 225 aa  116  3e-25  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.665179 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  37.79 
 
 		 226 aa  116  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  34.72 
 
 		 215 aa  115  3.9999999999999997e-25  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  35.43 
 
 		 225 aa  115  5e-25  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  35 
 
 		 224 aa  115  5e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013947  Snas_4871  two component transcriptional regulator, LuxR family  35.21 
 
 		 222 aa  115  5e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.134443  normal  0.31614 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  36.67 
 
 		 207 aa  115  5e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.966789 
 
 
-
 
NC_014210  Ndas_4749  two component transcriptional regulator, LuxR family  36.32 
 
 		 223 aa  115  6e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  36.7 
 
 		 244 aa  115  6e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_1611  two component transcriptional regulator, LuxR family  36.36 
 
 		 208 aa  115  6e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.548364  normal  1 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  37.27 
 
 		 225 aa  115  6e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  37.67 
 
 		 222 aa  115  6e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  37.61 
 
 		 222 aa  115  6.9999999999999995e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013131  Caci_0094  two component transcriptional regulator, LuxR family  35.05 
 
 		 233 aa  115  6.9999999999999995e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0277195 
 
 
-
 
NC_012669  Bcav_2188  two component transcriptional regulator, LuxR family  39.07 
 
 		 220 aa  115  7.999999999999999e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.546074  normal  1 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  34.72 
 
 		 215 aa  114  7.999999999999999e-25  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  34.72 
 
 		 215 aa  114  7.999999999999999e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  34.72 
 
 		 215 aa  114  7.999999999999999e-25  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  35.02 
 
 		 217 aa  115  7.999999999999999e-25  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  34.72 
 
 		 215 aa  114  7.999999999999999e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  36.53 
 
 		 217 aa  114  7.999999999999999e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  34.72 
 
 		 215 aa  114  7.999999999999999e-25  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  34.26 
 
 		 215 aa  114  8.999999999999998e-25  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  38.12 
 
 		 220 aa  114  1.0000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  38.18 
 
 		 221 aa  114  1.0000000000000001e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.685529 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  37.61 
 
 		 207 aa  114  1.0000000000000001e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  37.38 
 
 		 219 aa  114  1.0000000000000001e-24  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  36.92 
 
 		 219 aa  114  1.0000000000000001e-24  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal  1 
 
 
-
 
NC_009921  Franean1_0533  two component LuxR family transcriptional regulator  38.46 
 
 		 219 aa  114  1.0000000000000001e-24  Frankia sp. EAN1pec  Bacteria  normal  0.405575  normal  1 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  36.89 
 
 		 216 aa  113  2.0000000000000002e-24  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  37.07 
 
 		 217 aa  113  2.0000000000000002e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  35.48 
 
 		 218 aa  113  2.0000000000000002e-24  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  36.04 
 
 		 225 aa  113  2.0000000000000002e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  36.32 
 
 		 216 aa  114  2.0000000000000002e-24  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  36.87 
 
 		 214 aa  113  2.0000000000000002e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  33.8 
 
 		 215 aa  114  2.0000000000000002e-24  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  37.8 
 
 		 213 aa  112  3e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  38.18 
 
 		 209 aa  113  3e-24  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
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