Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0094 |
Symbol | |
ID | 4117665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 98490 |
End bp | 99158 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638034887 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_642886 |
Protein GI | 108802949 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGCGCG TTCTTCTCGT GGAAGACCAC GCTTCCTTCC GGCAGGCGCT GGCCCTGCTC TTCGACGCCG AGCCCGGCTT CGAGGTGGCC GGACAGGCGG GCACGCTCAA GGAGGCGCGC CGGGTGGCCT CCGGGAGGGA GCCGCGCCCG ACGCTGGGCA TCATAGACCT CAACCTCCCG GACGGGGACG GCTCGCAGCT CATCGGGGAG CTGCGCGAGC AGAACCCGGA CTTCGCCGCG CTGGTGCTCA CCGCCAGCGT GGACAGGGCG GATCACGCCC GGGCCGTGGA GGCTGGGGCG GCCGGGGTGC TGCACAAGAG CGCGGACGTG GACGAGATCC TGGACGCCGC CCGCCGGCTC GCGGCCGGCG AGCCGCTCAT GAGCCCGCAG GAGGTGGCCG AGATGATCCG GCTGGCGGGC AGGAGCCGCG AGGAGGAGCG GGGCCTGCGC GAGAACGCCG CCCGGCTCAC CCCCCGCGAG CGGGAGGTGT TGCAGGCGCT GGCCGAGGGG CTGAGCAACC GGGAGATAGC CGAGCGGCTG CACATGAGCG TGGACACCGA GCGCACCCAC ATGGTGAACA TCCTGAGCAA GCTGGGGGCG CACTCCCGGC TGCAGGCGCT GGTGCTCGCC GCCCGGGCCG GGGTGGTGCG GCTGGGGGGG GACGGCTAG
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Protein sequence | MQRVLLVEDH ASFRQALALL FDAEPGFEVA GQAGTLKEAR RVASGREPRP TLGIIDLNLP DGDGSQLIGE LREQNPDFAA LVLTASVDRA DHARAVEAGA AGVLHKSADV DEILDAARRL AAGEPLMSPQ EVAEMIRLAG RSREEERGLR ENAARLTPRE REVLQALAEG LSNREIAERL HMSVDTERTH MVNILSKLGA HSRLQALVLA ARAGVVRLGG DG
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