More than 300 homologs were found in PanDaTox collection
for query gene Jden_1602 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_1602  two component transcriptional regulator, LuxR family  100 
 
 
226 aa  449  1e-125  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_25620  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.69 
 
 
219 aa  179  4e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.263807 
 
 
-
 
NC_013169  Ksed_06250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.89 
 
 
228 aa  173  1.9999999999999998e-42  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  43.78 
 
 
230 aa  169  4e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  43.84 
 
 
219 aa  167  1e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  42.15 
 
 
228 aa  165  4e-40  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  45.87 
 
 
220 aa  165  5.9999999999999996e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  45.37 
 
 
217 aa  157  1e-37  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40.28 
 
 
222 aa  156  3e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  41.28 
 
 
232 aa  155  7e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  43.06 
 
 
222 aa  152  4e-36  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  41.82 
 
 
223 aa  152  4e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  43.98 
 
 
233 aa  152  5e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  44.44 
 
 
225 aa  151  8e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  45.62 
 
 
220 aa  151  8.999999999999999e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  42.13 
 
 
216 aa  150  1e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  39.81 
 
 
225 aa  150  2e-35  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  41.48 
 
 
230 aa  150  2e-35  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  42.01 
 
 
223 aa  150  2e-35  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  36.16 
 
 
244 aa  149  3e-35  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  43.78 
 
 
215 aa  149  5e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.39 
 
 
229 aa  149  5e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  41.1 
 
 
229 aa  148  6e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_014158  Tpau_0647  two component transcriptional regulator, LuxR family  39.35 
 
 
212 aa  147  1.0000000000000001e-34  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.518884  n/a   
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  40.85 
 
 
213 aa  147  1.0000000000000001e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.47 
 
 
230 aa  147  1.0000000000000001e-34  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  42.53 
 
 
228 aa  147  2.0000000000000003e-34  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  41.12 
 
 
221 aa  146  2.0000000000000003e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  44.6 
 
 
223 aa  147  2.0000000000000003e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  42.06 
 
 
227 aa  146  3e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  39.73 
 
 
225 aa  145  4.0000000000000006e-34  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  41.28 
 
 
215 aa  145  4.0000000000000006e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  40.85 
 
 
214 aa  145  5e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  41.55 
 
 
225 aa  145  5e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  41.47 
 
 
219 aa  144  8.000000000000001e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  41.01 
 
 
224 aa  144  1e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.81 
 
 
222 aa  144  1e-33  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  41.59 
 
 
222 aa  143  2e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  39.63 
 
 
226 aa  143  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  36.56 
 
 
228 aa  142  5e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  42.33 
 
 
241 aa  142  5e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.2 
 
 
222 aa  142  5e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  40.19 
 
 
220 aa  141  8e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  40.64 
 
 
221 aa  141  8e-33  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  38.32 
 
 
221 aa  141  9e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  39.37 
 
 
234 aa  141  9e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  39.81 
 
 
223 aa  141  9e-33  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  39.27 
 
 
224 aa  140  9.999999999999999e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  39.35 
 
 
226 aa  140  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  39.45 
 
 
224 aa  140  9.999999999999999e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  37.33 
 
 
224 aa  140  9.999999999999999e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  37 
 
 
231 aa  140  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  39.81 
 
 
217 aa  139  1.9999999999999998e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  38.43 
 
 
239 aa  140  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.59 
 
 
247 aa  140  1.9999999999999998e-32  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  40.45 
 
 
221 aa  140  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  40.28 
 
 
225 aa  140  1.9999999999999998e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  43.4 
 
 
211 aa  139  3e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  37.89 
 
 
234 aa  139  3e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.12 
 
 
236 aa  139  3.9999999999999997e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  40.45 
 
 
225 aa  139  3.9999999999999997e-32  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  39.25 
 
 
216 aa  139  3.9999999999999997e-32  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  41.01 
 
 
217 aa  138  6e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013159  Svir_32780  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  39.63 
 
 
216 aa  138  7e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  39.21 
 
 
230 aa  138  7.999999999999999e-32  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  41.18 
 
 
235 aa  138  8.999999999999999e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_013947  Snas_3324  two component transcriptional regulator, LuxR family  39.44 
 
 
219 aa  138  8.999999999999999e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0107044  normal  0.345616 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  39.53 
 
 
220 aa  137  1e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013521  Sked_19740  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40.91 
 
 
216 aa  137  1e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682926  normal 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  41.67 
 
 
212 aa  137  1e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  38.32 
 
 
215 aa  137  2e-31  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  37.21 
 
 
235 aa  136  2e-31  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  40.09 
 
 
227 aa  136  2e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  37.07 
 
 
250 aa  136  2e-31  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  38.57 
 
 
226 aa  137  2e-31  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  40.65 
 
 
220 aa  137  2e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  42.33 
 
 
245 aa  136  2e-31  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  40.55 
 
 
222 aa  136  2e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  37.16 
 
 
226 aa  137  2e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  40.09 
 
 
225 aa  136  3.0000000000000003e-31  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  37.66 
 
 
250 aa  136  3.0000000000000003e-31  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  36.45 
 
 
218 aa  136  3.0000000000000003e-31  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  36.99 
 
 
225 aa  136  3.0000000000000003e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  40.34 
 
 
249 aa  136  3.0000000000000003e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  39.45 
 
 
227 aa  136  3.0000000000000003e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  38.43 
 
 
220 aa  136  3.0000000000000003e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  39.29 
 
 
230 aa  135  4e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  38.71 
 
 
213 aa  135  5e-31  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  40.28 
 
 
221 aa  135  5e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  38.71 
 
 
226 aa  135  5e-31  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013235  Namu_4067  two component transcriptional regulator, LuxR family  41.59 
 
 
218 aa  135  6.0000000000000005e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.352272 
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  38.64 
 
 
226 aa  135  6.0000000000000005e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  38.53 
 
 
215 aa  135  7.000000000000001e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  38.71 
 
 
226 aa  135  7.000000000000001e-31  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  41.01 
 
 
217 aa  134  8e-31  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  38.71 
 
 
226 aa  135  8e-31  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  39.13 
 
 
214 aa  134  8e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  36.82 
 
 
219 aa  135  8e-31  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  39.81 
 
 
225 aa  134  9.999999999999999e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  39.35 
 
 
215 aa  134  9.999999999999999e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
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