More than 300 homologs were found in PanDaTox collection
for query gene Ssed_0592 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_0592  methyl-accepting chemotaxis protein  100 
 
 
486 aa  975    Shewanella sediminis HAW-EB3  Bacteria  normal  0.774563  hitchhiker  0.00134622 
 
 
-
 
NC_009783  VIBHAR_01599  hypothetical protein  51.89 
 
 
483 aa  484  1e-135  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  30.27 
 
 
860 aa  119  9.999999999999999e-26  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_011369  Rleg2_0221  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.5 
 
 
785 aa  119  1.9999999999999998e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  31.45 
 
 
695 aa  117  3.9999999999999997e-25  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.13 
 
 
888 aa  117  5e-25  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5372  methyl-accepting chemotaxis sensory transducer  30.48 
 
 
627 aa  116  1.0000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.756404 
 
 
-
 
NC_009636  Smed_2893  methyl-accepting chemotaxis sensory transducer  31.41 
 
 
589 aa  115  2.0000000000000002e-24  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.93 
 
 
1123 aa  115  2.0000000000000002e-24  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0697  methyl-accepting chemotaxis sensory transducer  35.62 
 
 
610 aa  114  3e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  31.27 
 
 
863 aa  114  4.0000000000000004e-24  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0366  methyl-accepting chemotaxis sensory transducer  29.12 
 
 
643 aa  114  4.0000000000000004e-24  Enterobacter sp. 638  Bacteria  normal  normal  0.0151066 
 
 
-
 
NC_011989  Avi_0806  methyl-accepting chemotaxis protein  33.62 
 
 
842 aa  114  5e-24  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0640  methyl-accepting chemotaxis sensory transducer  36.09 
 
 
604 aa  114  5e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.122515  normal  0.297773 
 
 
-
 
NC_012848  Rleg_4978  methyl-accepting chemotaxis sensory transducer  33.48 
 
 
846 aa  112  1.0000000000000001e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.23325  normal 
 
 
-
 
NC_011369  Rleg2_3632  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.27 
 
 
592 aa  112  1.0000000000000001e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.377399 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30 
 
 
864 aa  112  1.0000000000000001e-23  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3921  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.5 
 
 
586 aa  112  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1208  methyl-accepting chemotaxis protein  33.47 
 
 
604 aa  112  2.0000000000000002e-23  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  30 
 
 
678 aa  112  2.0000000000000002e-23  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_2775  methyl-accepting chemotaxis protein  34.25 
 
 
558 aa  112  2.0000000000000002e-23  Agrobacterium vitis S4  Bacteria  normal  0.536477  n/a   
 
 
-
 
NC_007520  Tcr_2004  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.32 
 
 
591 aa  111  2.0000000000000002e-23  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  0.0000000000169064  n/a   
 
 
-
 
NC_011989  Avi_2608  methyl-accepting chemotaxis protein  32.94 
 
 
655 aa  111  3e-23  Agrobacterium vitis S4  Bacteria  normal  0.445883  n/a   
 
 
-
 
NC_007520  Tcr_1984  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.85 
 
 
954 aa  111  4.0000000000000004e-23  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0214  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
663 aa  110  4.0000000000000004e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.287216 
 
 
-
 
NC_007520  Tcr_0777  methyl-accepting chemotaxis sensory transducer  29.83 
 
 
712 aa  110  5e-23  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3209  methyl-accepting chemotaxis sensory transducer  31.87 
 
 
782 aa  110  5e-23  Ruegeria sp. TM1040  Bacteria  normal  0.684679  normal 
 
 
-
 
NC_011989  Avi_4091  methyl-accepting chemotaxis protein  31.35 
 
 
592 aa  110  5e-23  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
549 aa  110  5e-23  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_007802  Jann_3360  methyl-accepting chemotaxis sensory transducer  32.41 
 
 
648 aa  110  7.000000000000001e-23  Jannaschia sp. CCS1  Bacteria  normal  0.59059  normal 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  31.25 
 
 
767 aa  110  7.000000000000001e-23  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5554  methyl-accepting chemotaxis protein  33.96 
 
 
653 aa  110  8.000000000000001e-23  Agrobacterium vitis S4  Bacteria  normal  0.0672502  n/a   
 
 
-
 
NC_014150  Bmur_2519  methyl-accepting chemotaxis sensory transducer  30.08 
 
 
613 aa  109  1e-22  Brachyspira murdochii DSM 12563  Bacteria  unclonable  4.28482e-19  n/a   
 
 
-
 
NC_011989  Avi_1200  methyl-accepting chemotaxis protein  32.02 
 
 
728 aa  109  1e-22  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4524  methyl-accepting chemotaxis sensory transducer  30.31 
 
 
661 aa  109  1e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.66296 
 
 
-
 
NC_012848  Rleg_5092  methyl-accepting chemotaxis sensory transducer  32.44 
 
 
626 aa  109  1e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.359668  normal  0.0114189 
 
 
-
 
NC_009012  Cthe_0039  methyl-accepting chemotaxis sensory transducer  34.05 
 
 
623 aa  109  1e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  32.03 
 
 
547 aa  108  2e-22  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_010625  Bphy_5569  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.06 
 
 
630 aa  108  2e-22  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0185  methyl-accepting chemotaxis sensory transducer  33.46 
 
 
669 aa  108  2e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_2139  methyl-accepting chemotaxis protein  31.98 
 
 
616 aa  108  2e-22  Burkholderia pseudomallei 1710b  Bacteria  normal  0.942679  n/a   
 
 
-
 
NC_012912  Dd1591_1802  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.08 
 
 
515 aa  108  2e-22  Dickeya zeae Ech1591  Bacteria  normal  0.0853497  n/a   
 
 
-
 
NC_012880  Dd703_2509  methyl-accepting chemotaxis sensory transducer  33.48 
 
 
557 aa  108  2e-22  Dickeya dadantii Ech703  Bacteria  normal  0.377261  n/a   
 
 
-
 
NC_011989  Avi_4113  methyl-accepting chemotaxis protein  33.49 
 
 
778 aa  108  3e-22  Agrobacterium vitis S4  Bacteria  normal  0.433818  n/a   
 
 
-
 
NC_006348  BMA1130  methyl-accepting chemotaxis protein  31.98 
 
 
580 aa  108  3e-22  Burkholderia mallei ATCC 23344  Bacteria  normal  0.306094  n/a   
 
 
-
 
NC_011094  SeSA_A3335  methyl-accepting chemotaxis sensory transducer  32.03 
 
 
547 aa  108  3e-22  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.499063 
 
 
-
 
NC_007908  Rfer_2350  methyl-accepting chemotaxis sensory transducer  33.83 
 
 
515 aa  108  3e-22  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0236  methyl-accepting chemotaxis sensory transducer  35.21 
 
 
660 aa  108  3e-22  Caulobacter sp. K31  Bacteria  normal  0.105118  normal 
 
 
-
 
NC_008752  Aave_1100  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
611 aa  108  3e-22  Acidovorax citrulli AAC00-1  Bacteria  normal  0.127748  normal 
 
 
-
 
NC_012912  Dd1591_3111  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.5 
 
 
596 aa  108  3e-22  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1571  methyl-accepting chemotaxis protein  31.98 
 
 
580 aa  108  3e-22  Burkholderia mallei SAVP1  Bacteria  normal  0.295886  n/a   
 
 
-
 
NC_008836  BMA10229_A0232  methyl-accepting chemotaxis protein  31.98 
 
 
580 aa  108  3e-22  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1613  methyl-accepting chemotaxis sensory transducer  34.45 
 
 
603 aa  108  3e-22  Sinorhizobium medicae WSM419  Bacteria  normal  0.183078  normal  0.160096 
 
 
-
 
NC_009076  BURPS1106A_2002  methyl-accepting chemotaxis protein  31.98 
 
 
580 aa  108  3e-22  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0927  methyl-accepting chemotaxis protein  31.98 
 
 
580 aa  108  3e-22  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0401  methyl-accepting chemotaxis sensory transducer  34.22 
 
 
615 aa  107  4e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.000192098 
 
 
-
 
NC_011989  Avi_1547  methyl-accepting chemotaxis protein  34.15 
 
 
635 aa  107  4e-22  Agrobacterium vitis S4  Bacteria  normal  0.0672502  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  30.82 
 
 
541 aa  107  4e-22  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1983  methyl-accepting chemotaxis protein  31.98 
 
 
580 aa  107  4e-22  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2737  methyl-accepting chemotaxis sensory transducer  30.82 
 
 
452 aa  107  4e-22  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00060467  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.87 
 
 
1170 aa  107  5e-22  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2223  methyl-accepting chemotaxis sensory transducer  29.36 
 
 
508 aa  107  5e-22  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0110  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.73 
 
 
588 aa  107  6e-22  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.885184  normal  0.0508963 
 
 
-
 
NC_012854  Rleg_6402  methyl-accepting chemotaxis sensory transducer  30.31 
 
 
688 aa  106  7e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.579482  normal  0.320846 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  30.57 
 
 
519 aa  106  7e-22  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I2374  methyl-accepting chemotaxis protein  31.35 
 
 
586 aa  106  9e-22  Burkholderia thailandensis E264  Bacteria  normal  0.205822  n/a   
 
 
-
 
NC_007963  Csal_1726  methyl-accepting chemotaxis sensory transducer  33.17 
 
 
702 aa  106  9e-22  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.333472  n/a   
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  33.47 
 
 
589 aa  106  9e-22  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  31.6 
 
 
547 aa  106  9e-22  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_006348  BMA2894  methyl-accepting chemotaxis protein, putative  34.48 
 
 
605 aa  105  1e-21  Burkholderia mallei ATCC 23344  Bacteria  normal  0.955347  n/a   
 
 
-
 
NC_010002  Daci_0740  methyl-accepting chemotaxis sensory transducer  34.8 
 
 
565 aa  106  1e-21  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0112  putative methyl-accepting chemotaxis protein  34.48 
 
 
605 aa  105  1e-21  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  31.6 
 
 
547 aa  106  1e-21  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1083  methyl-accepting chemotaxis sensory transducer  35.17 
 
 
590 aa  106  1e-21  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1003  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.72 
 
 
596 aa  105  1e-21  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0626  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.51 
 
 
726 aa  105  1e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  31.6 
 
 
547 aa  106  1e-21  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  32.79 
 
 
561 aa  106  1e-21  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_008785  BMASAVP1_A3471  putative methyl-accepting chemotaxis protein  34.48 
 
 
605 aa  106  1e-21  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010335  Caul_5142  methyl-accepting chemotaxis sensory transducer  32.54 
 
 
599 aa  106  1e-21  Caulobacter sp. K31  Bacteria  normal  0.367406  normal  0.838811 
 
 
-
 
NC_009074  BURPS668_3894  methyl-accepting chemotaxis protein  34.48 
 
 
601 aa  105  1e-21  Burkholderia pseudomallei 668  Bacteria  normal  0.0518753  n/a   
 
 
-
 
NC_010581  Bind_3620  methyl-accepting chemotaxis sensory transducer  31.65 
 
 
677 aa  105  1e-21  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0125911 
 
 
-
 
NC_009076  BURPS1106A_3975  methyl-accepting chemotaxis protein  34.48 
 
 
601 aa  105  1e-21  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  36.4 
 
 
719 aa  105  2e-21  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3929  methyl-accepting chemotaxis protein  33.33 
 
 
505 aa  105  2e-21  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  34.42 
 
 
587 aa  105  2e-21  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.74 
 
 
519 aa  105  2e-21  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  31.16 
 
 
579 aa  105  2e-21  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_013421  Pecwa_3307  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.38 
 
 
596 aa  105  2e-21  Pectobacterium wasabiae WPP163  Bacteria  normal  0.298951  n/a   
 
 
-
 
NC_010002  Daci_0582  methyl-accepting chemotaxis sensory transducer  36.32 
 
 
610 aa  105  2e-21  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0958  methyl-accepting chemotaxis protein  33.62 
 
 
610 aa  105  2e-21  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011984  Avi_9088  methyl-accepting chemotaxis protein  33.8 
 
 
761 aa  105  2e-21  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0368  methyl-accepting chemotaxis sensory transducer  32.77 
 
 
843 aa  105  2e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0662296 
 
 
-
 
NC_010581  Bind_1798  methyl-accepting chemotaxis sensory transducer  31.67 
 
 
615 aa  105  2e-21  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.371991  normal 
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.43 
 
 
519 aa  105  2e-21  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4670  methyl-accepting chemotaxis sensory transducer  34.36 
 
 
625 aa  105  2e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.817515 
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.43 
 
 
519 aa  105  2e-21  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_011989  Avi_0980  methyl-accepting chemotaxis protein  36.22 
 
 
611 aa  105  2e-21  Agrobacterium vitis S4  Bacteria  normal  0.442512  n/a   
 
 
-
 
NC_011368  Rleg2_5296  methyl-accepting chemotaxis sensory transducer  34.33 
 
 
845 aa  105  2e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.706556  normal  0.0870205 
 
 
-
 
NC_003295  RSc3136  putative methyl-accepting chemotaxis transmembrane protein  29.66 
 
 
661 aa  105  3e-21  Ralstonia solanacearum GMI1000  Bacteria  normal  0.598743  normal 
 
 
-
 
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