More than 300 homologs were found in PanDaTox collection
for query gene Rfer_2350 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_2350  methyl-accepting chemotaxis sensory transducer  100 
 
 
515 aa  1021    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2342  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
508 aa  356  5e-97  Rhodoferax ferrireducens T118  Bacteria  normal  0.10605  n/a   
 
 
-
 
NC_008782  Ajs_2065  methyl-accepting chemotaxis sensory transducer  44.69 
 
 
554 aa  343  5e-93  Acidovorax sp. JS42  Bacteria  normal  0.460232  normal  0.464376 
 
 
-
 
NC_011992  Dtpsy_1888  methyl-accepting chemotaxis sensory transducer  46.58 
 
 
487 aa  337  3.9999999999999995e-91  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2486  methyl-accepting chemotaxis sensory transducer  42.8 
 
 
504 aa  311  2e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  0.961139  normal  0.110025 
 
 
-
 
NC_010002  Daci_3618  methyl-accepting chemotaxis sensory transducer  42.92 
 
 
512 aa  281  1e-74  Delftia acidovorans SPH-1  Bacteria  normal  0.0151839  normal  0.0370629 
 
 
-
 
NC_007908  Rfer_3286  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
499 aa  230  5e-59  Rhodoferax ferrireducens T118  Bacteria  normal  0.729026  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  40.81 
 
 
543 aa  217  2.9999999999999998e-55  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A4084  methyl-accepting chemotaxis sensory transducer  45.39 
 
 
511 aa  216  5e-55  Burkholderia sp. 383  Bacteria  normal  0.51282  normal  0.262349 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  45.02 
 
 
515 aa  216  9.999999999999999e-55  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  38.94 
 
 
589 aa  212  1e-53  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  40.92 
 
 
569 aa  211  2e-53  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  38.76 
 
 
554 aa  210  4e-53  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  39.63 
 
 
561 aa  209  7e-53  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_010002  Daci_0036  methyl-accepting chemotaxis sensory transducer  43.16 
 
 
567 aa  208  2e-52  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1100  methyl-accepting chemotaxis sensory transducer  42.52 
 
 
611 aa  208  2e-52  Acidovorax citrulli AAC00-1  Bacteria  normal  0.127748  normal 
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
559 aa  207  3e-52  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  42.81 
 
 
678 aa  207  3e-52  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  42.34 
 
 
550 aa  207  4e-52  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  41.1 
 
 
642 aa  207  4e-52  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  42.37 
 
 
550 aa  206  5e-52  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  37.57 
 
 
557 aa  206  8e-52  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  39.1 
 
 
583 aa  206  8e-52  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  39.18 
 
 
628 aa  206  8e-52  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2139  methyl-accepting chemotaxis sensory transducer  41.75 
 
 
512 aa  206  9e-52  Enterobacter sp. 638  Bacteria  normal  0.619697  normal 
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  37.53 
 
 
514 aa  206  9e-52  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  43.4 
 
 
555 aa  205  1e-51  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  40.59 
 
 
542 aa  206  1e-51  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  40.81 
 
 
553 aa  205  1e-51  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_01378  methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor  37.85 
 
 
546 aa  205  2e-51  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2225  methyl-accepting chemotaxis sensory transducer  37.85 
 
 
546 aa  205  2e-51  Escherichia coli DH1  Bacteria  normal  0.213228  n/a   
 
 
-
 
NC_012892  B21_01390  hypothetical protein  37.85 
 
 
546 aa  205  2e-51  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1753  methyl-accepting chemotaxis protein III  37.85 
 
 
546 aa  205  2e-51  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  2.79367e-17 
 
 
-
 
NC_009801  EcE24377A_1600  methyl-accepting chemotaxis protein III  37.85 
 
 
546 aa  205  2e-51  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  41.72 
 
 
573 aa  205  2e-51  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  38.05 
 
 
547 aa  204  2e-51  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  37.07 
 
 
661 aa  204  3e-51  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3786  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.72 
 
 
610 aa  204  3e-51  Delftia acidovorans SPH-1  Bacteria  normal  0.0254049  normal  0.3858 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  40.36 
 
 
537 aa  204  3e-51  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  42.76 
 
 
508 aa  204  3e-51  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  38.05 
 
 
547 aa  204  4e-51  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  38.05 
 
 
547 aa  204  4e-51  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  39.88 
 
 
572 aa  204  5e-51  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_009800  EcHS_A1503  methyl-accepting chemotaxis protein III  37.54 
 
 
546 aa  203  5e-51  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  38.05 
 
 
547 aa  203  5e-51  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_2238  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
546 aa  203  6e-51  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2086  methyl-accepting chemotaxis sensory transducer  37.16 
 
 
653 aa  203  6e-51  Dickeya zeae Ech1591  Bacteria  normal  0.0240769  n/a   
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  41.16 
 
 
551 aa  203  6e-51  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  40.67 
 
 
594 aa  203  6e-51  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_011353  ECH74115_2026  methyl-accepting chemotaxis protein III  37.85 
 
 
470 aa  202  8e-51  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000214401 
 
 
-
 
NC_012856  Rpic12D_3176  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.76 
 
 
600 aa  202  9e-51  Ralstonia pickettii 12D  Bacteria  normal  0.0503971  normal 
 
 
-
 
NC_010682  Rpic_3501  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.63 
 
 
600 aa  202  9e-51  Ralstonia pickettii 12J  Bacteria  normal  normal  0.112529 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  38.55 
 
 
553 aa  202  9e-51  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  37.89 
 
 
555 aa  202  9.999999999999999e-51  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  38.32 
 
 
553 aa  202  9.999999999999999e-51  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  38.32 
 
 
553 aa  202  9.999999999999999e-51  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_007650  BTH_II2191  methyl-accepting chemotaxis protein  42.73 
 
 
666 aa  201  1.9999999999999998e-50  Burkholderia thailandensis E264  Bacteria  normal  0.918882  n/a   
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  38.87 
 
 
630 aa  202  1.9999999999999998e-50  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  38.55 
 
 
553 aa  201  1.9999999999999998e-50  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  41.29 
 
 
523 aa  201  3e-50  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5410  methyl-accepting chemotaxis sensory transducer  41.99 
 
 
635 aa  201  3e-50  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  37.97 
 
 
585 aa  200  3.9999999999999996e-50  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_012917  PC1_2223  methyl-accepting chemotaxis sensory transducer  38.15 
 
 
508 aa  200  3.9999999999999996e-50  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  38.7 
 
 
559 aa  201  3.9999999999999996e-50  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_012912  Dd1591_0055  methyl-accepting chemotaxis sensory transducer  37.58 
 
 
628 aa  200  3.9999999999999996e-50  Dickeya zeae Ech1591  Bacteria  normal  0.608397  n/a   
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  37.71 
 
 
547 aa  201  3.9999999999999996e-50  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_1415  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
546 aa  201  3.9999999999999996e-50  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  39.87 
 
 
597 aa  200  3.9999999999999996e-50  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_4355  methyl-accepting chemotaxis sensory transducer  39.68 
 
 
540 aa  200  5e-50  Pectobacterium wasabiae WPP163  Bacteria  normal  0.31766  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
567 aa  200  5e-50  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  40.31 
 
 
586 aa  200  6e-50  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  38.91 
 
 
587 aa  200  6e-50  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007963  Csal_0176  methyl-accepting chemotaxis sensory transducer  39.63 
 
 
427 aa  200  6e-50  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.8922  n/a   
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  37.87 
 
 
554 aa  199  7.999999999999999e-50  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
618 aa  199  7.999999999999999e-50  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
596 aa  199  7.999999999999999e-50  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1602  methyl-accepting chemotaxis sensory transducer  38.07 
 
 
554 aa  199  7.999999999999999e-50  Dickeya zeae Ech1591  Bacteria  normal  0.33331  n/a   
 
 
-
 
NC_010498  EcSMS35_1299  methyl-accepting protein IV  39.14 
 
 
533 aa  199  9e-50  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00139959 
 
 
-
 
NC_003295  RSc3307  putative methyl-accepting chemotaxis transmembrane protein  38.76 
 
 
646 aa  199  1.0000000000000001e-49  Ralstonia solanacearum GMI1000  Bacteria  normal  0.154231  normal 
 
 
-
 
NC_012560  Avin_27960  methyl accepting chemotaxis sensory transducer  40.48 
 
 
575 aa  199  1.0000000000000001e-49  Azotobacter vinelandii DJ  Bacteria  normal  0.187216  n/a   
 
 
-
 
NC_009075  BURPS668_A0379  methyl-accepting chemotaxis protein  43.48 
 
 
542 aa  199  1.0000000000000001e-49  Burkholderia pseudomallei 668  Bacteria  normal  0.366227  n/a   
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  37.58 
 
 
652 aa  199  1.0000000000000001e-49  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  36.42 
 
 
552 aa  199  1.0000000000000001e-49  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_009078  BURPS1106A_A0285  methyl-accepting chemotaxis protein  43.48 
 
 
563 aa  199  1.0000000000000001e-49  Burkholderia pseudomallei 1106a  Bacteria  normal  0.877776  n/a   
 
 
-
 
NC_008782  Ajs_0020  methyl-accepting chemotaxis sensory transducer  39.87 
 
 
550 aa  199  1.0000000000000001e-49  Acidovorax sp. JS42  Bacteria  normal  normal  0.857372 
 
 
-
 
NC_012917  PC1_4072  methyl-accepting chemotaxis sensory transducer  40.91 
 
 
540 aa  199  1.0000000000000001e-49  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0038  methyl-accepting chemotaxis sensory transducer  39.87 
 
 
550 aa  198  2.0000000000000003e-49  Acidovorax ebreus TPSY  Bacteria  normal  0.398829  n/a   
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  38.32 
 
 
601 aa  198  2.0000000000000003e-49  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
562 aa  198  2.0000000000000003e-49  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_008752  Aave_0035  methyl-accepting chemotaxis sensory transducer  40.37 
 
 
558 aa  198  2.0000000000000003e-49  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  42.25 
 
 
536 aa  198  2.0000000000000003e-49  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_012912  Dd1591_0395  methyl-accepting chemotaxis sensory transducer  39.52 
 
 
556 aa  198  2.0000000000000003e-49  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0881  methyl-accepting chemotaxis protein  43.14 
 
 
661 aa  197  3e-49  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1733  methyl-accepting chemotaxis protein I  43.14 
 
 
661 aa  197  3e-49  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1169  methyl-accepting chemotaxis protein  43.14 
 
 
542 aa  197  3e-49  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1569  methyl-accepting chemotaxis sensory transducer  39.62 
 
 
554 aa  197  3e-49  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  40.12 
 
 
513 aa  197  3e-49  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009079  BMA10247_A2146  methyl-accepting chemotaxis protein  43.14 
 
 
542 aa  197  3e-49  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1981  methyl-accepting protein IV  38.84 
 
 
533 aa  197  3e-49  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0007  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.02 
 
 
636 aa  197  3e-49  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>