| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3176 |
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| Symbol | |
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| ID | 8020860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3358720 |
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| End bp | 3360522 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644831972 |
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| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
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| Protein accession | YP_002983115 |
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| Protein GI | 241664755 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0503971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCCT CTCTCCGCAC CCGAATTCTC CTCATCTCAT CGGCCACGGT GGTCGGCGCC
CTCGCCCTGT CCGGCGCTGC CACCTATTCC ATCGTGCGCT CCAACACGAT GGAATCGATC
GACCAGAACC TGGCTGCCAT CGCCAGCGGC AATACGCTCG CCATCGACAA ATGGGTCGCG
GCGAAGGCGC AGGCCGTCAA GGCCACCGCA GGCGTGATCG AGCATGGCGA TCCGCAAGGC
TTCGGCAAGC ACATGGGCGA CGCCAACGGT TTCCCCATCA TCACGATCGG CTGGACCGAC
AAGAGCTTCA TCTCCACCAG CGCCACCACG CCCAAGGATT ACGATCCGAC CGGCCGCCCC
TGGTACAAGC AAGCCATTGC CGCAGGCCAG TTGCTCGTCA CCAAGCCCTA CGGCGATGTG
TCGACCGGCG TGCCGTACGT TTCATTTGCG GCGCCGCTCG TCAAGAACGG CGAAACCACC
GGCGCGTTGT CCGGCGCCGT GCCGCTGGAC GGCGTGCGCG AGGTGGTTGC GGCGGTCCAC
CCGACACCGT CGAGCCTCGC CTTCGTGGTC GCCAAGGATG GCCAGGTGAT TGCCCATCCG
GACGCAAAAT TGATGCTGAA GCCGGCCACC GACGTGGCGG CTTCGCTCAC CGCCGACACG
CTCGGCAACC TGGCCAAGGC GACGTCGCCG CTGGAGGTTG AGCTGGCCGG CGCGCCGAAA
TTGCTCAAGG CGCAAGCCGT GCAGGGCACC GATTGGTACC TCGTGATTGC GCTGGACAAG
GCCGAAGCCA CCGCCGGTTT GCGCAACGTC GTCAAGGCGC TGGCCGTGGC CATGGTGCTG
CTGACGCTGG CCGCCGTGGG CATCGCCGCG TTCTTCACGT CGCAGTCGTT CCGCCGCCTG
TCGCAGGTGC GCGACGCAAT GGACACCATC GGCTCCGGCG GCGGCGACCT GACGCACCGT
CTGCCCGTGG TCGGCAACGA TGAAGTCGCG CAGATCAGCG CGTCGTTCAA CACCTTCATC
GACAAGATCG GCGAAGTGCT GCTGGAAGTG CGCGCCAGCG TCGACAGCAT GAAATCCGCC
ACCGGCGAGA TCGAAGCGGG CAACCGTGAT CTTTCCAACC GCACCGAGGT TTCGGCCAGC
AACCTGCAGG AAACCTCTGC CGCGTTGACG GAGTTGACGA CCAGCGTGAA GAACTCCGCC
GATGCGGCCG TGCAGGCCAC GCGCTTGGCG AGCGACGCAA GCGACGCCGC CACGCGCGGC
GGCGAGGTCG TCTCCAGCGC CGTCAGCACG ATGGATGAGA TTGCCAAGTC GTCGGCGCGC
ATTACGGAAA TCATTGGCGT GATCGACAGC ATTGCGTTCC AGACCAACAT CCTCGCGCTG
AACGCTGCAG TGGAAGCCGC CCGCGCCGGC GAGAACGGTC GCGGCTTTGC CGTGGTGGCT
GGCGAGGTGC GCACGCTGGC GCAACGCAGC GCCACGGCTG CCCGCGAAAT CAAGGACCTG
ATCCAGGCAT CGGAGGCCAG CGTGAAGACC GGCGCGCAAC GCGTGCAGGC TGCGGGCGCC
ACGATGCAGG AAATCGTGCA GGGCATCGAG CGTGTCGCGC GCATCATCGG CGAGATCGAC
GGCGCGATGC ATGAGCAAAG CACCGGTATC AGCCAGATCG ATCGCAGCGT CGCCGAGATG
GACCAGGCCA CGCAGCAGAA CGCCGCGCTG GTGGAGCAGT CGACGGCTGC ATCCTCGATG
CTCAACGAGC AGGCGCACGG TCTGGCTCGC ACGGTTGGGC TGTTCAAGCT GCGCAGCGCC
TGA
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| Protein sequence | MISSLRTRIL LISSATVVGA LALSGAATYS IVRSNTMESI DQNLAAIASG NTLAIDKWVA
AKAQAVKATA GVIEHGDPQG FGKHMGDANG FPIITIGWTD KSFISTSATT PKDYDPTGRP
WYKQAIAAGQ LLVTKPYGDV STGVPYVSFA APLVKNGETT GALSGAVPLD GVREVVAAVH
PTPSSLAFVV AKDGQVIAHP DAKLMLKPAT DVAASLTADT LGNLAKATSP LEVELAGAPK
LLKAQAVQGT DWYLVIALDK AEATAGLRNV VKALAVAMVL LTLAAVGIAA FFTSQSFRRL
SQVRDAMDTI GSGGGDLTHR LPVVGNDEVA QISASFNTFI DKIGEVLLEV RASVDSMKSA
TGEIEAGNRD LSNRTEVSAS NLQETSAALT ELTTSVKNSA DAAVQATRLA SDASDAATRG
GEVVSSAVST MDEIAKSSAR ITEIIGVIDS IAFQTNILAL NAAVEAARAG ENGRGFAVVA
GEVRTLAQRS ATAAREIKDL IQASEASVKT GAQRVQAAGA TMQEIVQGIE RVARIIGEID
GAMHEQSTGI SQIDRSVAEM DQATQQNAAL VEQSTAASSM LNEQAHGLAR TVGLFKLRSA
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