Gene RSc3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3307 
Symbol 
ID1222171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3568419 
End bp3570359 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content69% 
IMG OID637239724 
Productputative methyl-accepting chemotaxis transmembrane protein 
Protein accessionNP_521426 
Protein GI17548024 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.154231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTGAGT CATCTCAAGT TCCCCGCTCC CCTGCCGTAG CTTTTTCCAC GTGCGCATTC 
CGGCCGGCTG TCGCCGGAGT GCGGTGTCGT CATCGCGGTA CGCAGTCTGA TTCGTCTCCA
ACCTCAAAGA AAAGAATCAC GATGTCCTCT CTCCGCACCC GCATCCTCGT CATCTCTTCG
GCCACCGTGA TCGGTGCGCT CGCGCTGTCG GGGGCCGCCA CGTACGCCAT CGTGCGCGCC
AGCACGCTGG CATCCATCGA TCAGAACCTG ACGGCCATCG CCAGCGGCAA CACGCTGGCC
ATCGACAAGT GGGTGACAGC CAAGGCCCAG GCCGTGAAGG CGACGGCGGA GGCGGTGGAG
TACGGCGATC CGCATGGCCT GGTCAAGCAC ATGGGCGATG CCGATGGCTT CCCGATCACC
ACCGTCGGCT GGACCGACAA GACGTTCTTC TCCACCAGCG CCGGCACGCC CAAGGACTAC
GATCCGACCG CCCGCCCCTG GTACAAGTCG GCCATCGCCG CCGGCAAGCC GACCGTCACC
AAGCCTTACG GCGATGCGTC GACCGGCGTG CCGTACGTAT CGTTCGCCGC GCCGCTGATG
CGCAACGGCG CGGCGACCGG CGCGCTGAGC GGCGCGGTGC CGCTGGACGG CGTGCGCGAA
GTGGTGGCGG CGGTGCATCC GACGCCGTCG AGCCTGGCCT TCGTGGTGGC GCGCGACGGC
CAGGTGATCG CGCACCCCGA TGCCAAGCTG ATGCTCAAGC CGGTGACGGA GGTGTCGGCC
GCGCTGACGC CGGATGCGCT GACGTCGCTG GCCAAGGCGA CCGCGCCGCT GGAAGTGGAG
CTGGCCGGTG CCGCCAAGCT GCTCAAGGCG CAGGCGGTGC AGGGCACCGA CTGGTATCTG
GTGATCGCGC TGGACAAGGC TGAGGCCACC GCCGGCCTGC GCAGCGTGGC GCGCGCGCTG
GGGGTGGCGA TGGTGCTGCT GACGCTGGCG GCGGTAGGCA TCGCGGCGTT CTTCACCGCG
CAGTCGTTCC GCCGGCTGTC GCAGGTGCGC GATGCGATGG ACACCATCGG CTCCGGCGGC
GGCGACCTGA CGCATCGGCT GCCGGTGGTC GGCAACGATG AGGTGGCGCA GATCTCCGCA
TCGTTCAACA CCTTCATCGA CAAGATCGGC GAGGTGCTGC TGGAGGTGCG CGCCAGCGTC
GAAAACATGA AGTCCGCCAC CGGCGAGATC GAGATGGGCA ACCGCGACCT GTCGCTGCGC
ACGGAGACGT CGGCGAGCAA CCTGCAGGAA ACCTCGGCCG CACTCACCGA GCTGACCACC
AGCGTGAAGA ACTCCGCCGA GGCCGCAGTG CAGGCCACGC GCCTCGCGGG CGAGGCCAGC
GAGGCGGCCG TGCGCGGCGG CGAGGTGGTG TCGGGTGCGG TCAGCACGAT GGACGCGATC
GCGCAGTCGT CGTCGCGCAT CAGCGAGATC ATCGGCGTGA TCGACAGCAT TGCGTTCCAG
ACCAACATCC TCGCGCTCAA CGCCGCGGTG GAGGCCGCCC GCGCTGGCGA GAACGGCCGC
GGCTTTGCCG TGGTGGCCGG CGAGGTGCGC ACGCTGGCGC AGCGCAGCGC CGCCGCCGCG
CGCGAGATCA AGGCGCTCAT CCAGGCCTCG GAAGCCAGCG TCAAGGCCGG CGCCGAGCGC
GTCGATGCCG CTGGCGCGAC GATGCGCGAG ATCGTGGAAG GCATCCAGCG CGTCAGCCGC
ATCATCGGTG AGATCGACGG CGCCATGCAC GAGCAGAGCG CGGGCATCAG CCAGATCGAT
CGCAGCGTCG CCGAGATGGA TCAGGCCACG CAGCAGAACG CCGCGCTGGT GGAGCAATCG
ACCGCTGCCT CGTCGATGCT CAACGAGCAG GCGCATGGGC TGGCGCGCAC GGTTGGGCTG
TTCCGGCTGC GCGGGGGCTA G
 
Protein sequence
MRESSQVPRS PAVAFSTCAF RPAVAGVRCR HRGTQSDSSP TSKKRITMSS LRTRILVISS 
ATVIGALALS GAATYAIVRA STLASIDQNL TAIASGNTLA IDKWVTAKAQ AVKATAEAVE
YGDPHGLVKH MGDADGFPIT TVGWTDKTFF STSAGTPKDY DPTARPWYKS AIAAGKPTVT
KPYGDASTGV PYVSFAAPLM RNGAATGALS GAVPLDGVRE VVAAVHPTPS SLAFVVARDG
QVIAHPDAKL MLKPVTEVSA ALTPDALTSL AKATAPLEVE LAGAAKLLKA QAVQGTDWYL
VIALDKAEAT AGLRSVARAL GVAMVLLTLA AVGIAAFFTA QSFRRLSQVR DAMDTIGSGG
GDLTHRLPVV GNDEVAQISA SFNTFIDKIG EVLLEVRASV ENMKSATGEI EMGNRDLSLR
TETSASNLQE TSAALTELTT SVKNSAEAAV QATRLAGEAS EAAVRGGEVV SGAVSTMDAI
AQSSSRISEI IGVIDSIAFQ TNILALNAAV EAARAGENGR GFAVVAGEVR TLAQRSAAAA
REIKALIQAS EASVKAGAER VDAAGATMRE IVEGIQRVSR IIGEIDGAMH EQSAGISQID
RSVAEMDQAT QQNAALVEQS TAASSMLNEQ AHGLARTVGL FRLRGG