More than 300 homologs were found in PanDaTox collection
for query gene Rpic12D_3176 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003295  RSc3307  putative methyl-accepting chemotaxis transmembrane protein  87.44 
 
 
646 aa  1046    Ralstonia solanacearum GMI1000  Bacteria  normal  0.154231  normal 
 
 
-
 
NC_007348  Reut_B5136  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  60.1 
 
 
599 aa  687    Ralstonia eutropha JMP134  Bacteria  normal  0.481543  n/a   
 
 
-
 
NC_012856  Rpic12D_3176  methyl-accepting chemotaxis sensory transducer with Cache sensor  100 
 
 
600 aa  1194    Ralstonia pickettii 12D  Bacteria  normal  0.0503971  normal 
 
 
-
 
NC_010682  Rpic_3501  methyl-accepting chemotaxis sensory transducer with Cache sensor  98.83 
 
 
600 aa  1181    Ralstonia pickettii 12J  Bacteria  normal  normal  0.112529 
 
 
-
 
NC_010002  Daci_0582  methyl-accepting chemotaxis sensory transducer  67.84 
 
 
610 aa  773    Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1100  methyl-accepting chemotaxis sensory transducer  68.27 
 
 
611 aa  787    Acidovorax citrulli AAC00-1  Bacteria  normal  0.127748  normal 
 
 
-
 
NC_007509  Bcep18194_C6641  methyl-accepting chemotaxis sensory transducer  51.17 
 
 
609 aa  584  1.0000000000000001e-165  Burkholderia sp. 383  Bacteria  normal  normal  0.0855945 
 
 
-
 
NC_010512  Bcenmc03_6304  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.75 
 
 
605 aa  574  1.0000000000000001e-162  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.598133  normal 
 
 
-
 
NC_008544  Bcen2424_6698  methyl-accepting chemotaxis sensory transducer  51.75 
 
 
605 aa  575  1.0000000000000001e-162  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0770827  normal  0.965565 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.68 
 
 
608 aa  569  1e-161  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2718  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.84 
 
 
599 aa  562  1.0000000000000001e-159  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.34 
 
 
609 aa  562  1.0000000000000001e-159  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1405  methyl-accepting chemotaxis sensory transducer  51 
 
 
599 aa  556  1e-157  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  52.84 
 
 
617 aa  553  1e-156  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_008062  Bcen_6463  methyl-accepting chemotaxis sensory transducer  51.65 
 
 
654 aa  551  1e-155  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  51.25 
 
 
601 aa  545  1e-153  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0036  methyl-accepting chemotaxis sensory transducer  49.33 
 
 
599 aa  545  1e-153  Ralstonia eutropha JMP134  Bacteria  normal  0.226397  n/a   
 
 
-
 
NC_007511  Bcep18194_B1642  methyl-accepting chemotaxis sensory transducer  49.67 
 
 
599 aa  540  9.999999999999999e-153  Burkholderia sp. 383  Bacteria  normal  normal  0.255489 
 
 
-
 
NC_006348  BMA2894  methyl-accepting chemotaxis protein, putative  49.83 
 
 
605 aa  535  1e-151  Burkholderia mallei ATCC 23344  Bacteria  normal  0.955347  n/a   
 
 
-
 
NC_010515  Bcenmc03_5980  methyl-accepting chemotaxis sensory transducer with Cache sensor  49.67 
 
 
599 aa  537  1e-151  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A3471  putative methyl-accepting chemotaxis protein  50 
 
 
605 aa  537  1e-151  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3209  methyl-accepting chemotaxis protein, putative  50.17 
 
 
601 aa  535  1e-151  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3992  methyl-accepting chemotaxis sensory transducer  49.67 
 
 
599 aa  537  1e-151  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_1247  methyl-accepting chemotaxis sensory transducer  49.42 
 
 
609 aa  536  1e-151  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4375  methyl-accepting chemotaxis sensory transducer  49.67 
 
 
599 aa  537  1e-151  Burkholderia cenocepacia HI2424  Bacteria  normal  0.480091  normal 
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  49.5 
 
 
599 aa  538  1e-151  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_1273  methyl-accepting chemotaxis sensory transducer  49.25 
 
 
609 aa  535  1e-150  Burkholderia ambifaria MC40-6  Bacteria  normal  0.258977  normal  0.0501221 
 
 
-
 
NC_009074  BURPS668_3894  methyl-accepting chemotaxis protein  50 
 
 
601 aa  526  1e-148  Burkholderia pseudomallei 668  Bacteria  normal  0.0518753  n/a   
 
 
-
 
NC_007434  BURPS1710b_0112  putative methyl-accepting chemotaxis protein  50 
 
 
605 aa  525  1e-148  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3975  methyl-accepting chemotaxis protein  50 
 
 
601 aa  526  1e-148  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3790  methyl-accepting chemotaxis sensory transducer  50.67 
 
 
599 aa  527  1e-148  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.178746 
 
 
-
 
NC_010552  BamMC406_4256  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.33 
 
 
599 aa  521  1e-146  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.844754 
 
 
-
 
NC_012880  Dd703_2920  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.58 
 
 
596 aa  509  1e-143  Dickeya dadantii Ech703  Bacteria  normal  0.115472  n/a   
 
 
-
 
NC_012912  Dd1591_3111  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.91 
 
 
596 aa  493  9.999999999999999e-139  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1003  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.57 
 
 
596 aa  481  1e-134  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1452  methyl-accepting chemotaxis protein  45.48 
 
 
595 aa  477  1e-133  Yersinia pestis Angola  Bacteria  normal  0.19796  normal  0.220045 
 
 
-
 
NC_010465  YPK_2833  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.48 
 
 
595 aa  477  1e-133  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2753  methyl-accepting chemotaxis protein  45.32 
 
 
595 aa  475  1e-132  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0257893  n/a   
 
 
-
 
NC_013421  Pecwa_3307  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.24 
 
 
596 aa  472  1e-132  Pectobacterium wasabiae WPP163  Bacteria  normal  0.298951  n/a   
 
 
-
 
NC_007963  Csal_0126  methyl-accepting chemotaxis sensory transducer  44.91 
 
 
613 aa  469  1.0000000000000001e-131  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  45.91 
 
 
618 aa  464  1e-129  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.41 
 
 
617 aa  457  1e-127  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  45.7 
 
 
632 aa  457  1e-127  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3786  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.22 
 
 
610 aa  454  1.0000000000000001e-126  Delftia acidovorans SPH-1  Bacteria  normal  0.0254049  normal  0.3858 
 
 
-
 
NC_008836  BMA10229_A1648  putative methyl-accepting chemotaxis protein  48.03 
 
 
776 aa  447  1.0000000000000001e-124  Burkholderia mallei NCTC 10229  Bacteria  normal  0.562276  n/a   
 
 
-
 
NC_008752  Aave_1874  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
597 aa  439  1e-121  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0423277  normal 
 
 
-
 
NC_009436  Ent638_2328  methyl-accepting chemotaxis sensory transducer  43.48 
 
 
594 aa  434  1e-120  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3477  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.48 
 
 
606 aa  432  1e-120  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1099  methyl-accepting chemotaxis sensory transducer  36.22 
 
 
699 aa  315  1.9999999999999998e-84  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1081  methyl-accepting chemotaxis sensory transducer  40.85 
 
 
629 aa  305  1.0000000000000001e-81  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  59.15 
 
 
536 aa  298  2e-79  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  57.14 
 
 
554 aa  293  4e-78  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_010625  Bphy_5569  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.08 
 
 
630 aa  293  6e-78  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  56.34 
 
 
591 aa  291  3e-77  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  50.72 
 
 
674 aa  290  4e-77  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  50.72 
 
 
674 aa  290  5.0000000000000004e-77  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  56.34 
 
 
591 aa  290  5.0000000000000004e-77  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  51.24 
 
 
602 aa  287  5e-76  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  48.39 
 
 
543 aa  286  8e-76  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1423  methyl-accepting chemotaxis sensory transducer  41.48 
 
 
584 aa  285  1.0000000000000001e-75  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5471  methyl-accepting chemotaxis sensory transducer  38.38 
 
 
620 aa  283  7.000000000000001e-75  Burkholderia ambifaria AMMD  Bacteria  normal  0.407039  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  52.62 
 
 
542 aa  283  9e-75  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3618  methyl-accepting chemotaxis sensory transducer  38.52 
 
 
620 aa  282  1e-74  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0344374  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  47.65 
 
 
585 aa  281  2e-74  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  54.55 
 
 
508 aa  281  3e-74  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  55.83 
 
 
584 aa  281  3e-74  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0036  methyl-accepting chemotaxis sensory transducer  53.67 
 
 
567 aa  280  5e-74  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3785  methyl-accepting chemotaxis sensory transducer  37.76 
 
 
620 aa  280  6e-74  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0060774  normal  0.0147123 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  49.55 
 
 
589 aa  280  7e-74  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008061  Bcen_4628  methyl-accepting chemotaxis sensory transducer  37.76 
 
 
620 aa  280  7e-74  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3736  methyl-accepting chemotaxis sensory transducer  37.76 
 
 
620 aa  280  8e-74  Burkholderia cenocepacia HI2424  Bacteria  normal  0.455432  normal  0.0212994 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  49.12 
 
 
569 aa  278  2e-73  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C1139  methyl-accepting chemotaxis sensory transducer, Cache sensor  35 
 
 
630 aa  277  4e-73  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.584827 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  55.79 
 
 
578 aa  276  8e-73  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008752  Aave_0035  methyl-accepting chemotaxis sensory transducer  51.03 
 
 
558 aa  276  9e-73  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  53.71 
 
 
622 aa  275  1.0000000000000001e-72  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  51.09 
 
 
552 aa  275  2.0000000000000002e-72  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  55.83 
 
 
580 aa  275  2.0000000000000002e-72  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  48.1 
 
 
587 aa  274  3e-72  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.77 
 
 
579 aa  274  3e-72  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  48.53 
 
 
594 aa  273  6e-72  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_008782  Ajs_0020  methyl-accepting chemotaxis sensory transducer  54.23 
 
 
550 aa  273  7e-72  Acidovorax sp. JS42  Bacteria  normal  normal  0.857372 
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  44.83 
 
 
598 aa  272  1e-71  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  55.12 
 
 
661 aa  272  1e-71  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0038  methyl-accepting chemotaxis sensory transducer  54.23 
 
 
550 aa  272  1e-71  Acidovorax ebreus TPSY  Bacteria  normal  0.398829  n/a   
 
 
-
 
NC_007510  Bcep18194_A4084  methyl-accepting chemotaxis sensory transducer  54.06 
 
 
511 aa  271  2e-71  Burkholderia sp. 383  Bacteria  normal  0.51282  normal  0.262349 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  51.66 
 
 
547 aa  271  2e-71  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  51.66 
 
 
547 aa  271  2e-71  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
562 aa  272  2e-71  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  51.66 
 
 
547 aa  271  2.9999999999999997e-71  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0160  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
513 aa  271  2.9999999999999997e-71  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  51.32 
 
 
547 aa  271  2.9999999999999997e-71  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  45.74 
 
 
598 aa  270  4e-71  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_007963  Csal_1989  methyl-accepting chemotaxis sensory transducer  47.69 
 
 
556 aa  270  4e-71  Chromohalobacter salexigens DSM 3043  Bacteria  decreased coverage  0.00286784  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  52.3 
 
 
532 aa  270  5.9999999999999995e-71  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3723  HAMP domain-containing protein  38.79 
 
 
628 aa  270  5.9999999999999995e-71  Cupriavidus metallidurans CH34  Bacteria  normal  0.21159  normal  0.539738 
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  53.68 
 
 
843 aa  270  5.9999999999999995e-71  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  47.11 
 
 
549 aa  270  7e-71  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_007953  Bxe_C1067  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
634 aa  270  7e-71  Burkholderia xenovorans LB400  Bacteria  normal  0.318926  normal 
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  50.94 
 
 
561 aa  270  8e-71  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
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