More than 300 homologs were found in PanDaTox collection
for query gene BamMC406_4256 on replicon NC_010552
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009076  BURPS1106A_3975  methyl-accepting chemotaxis protein  70.88 
 
 
601 aa  812    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  63.27 
 
 
617 aa  702    Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_008836  BMA10229_A1648  putative methyl-accepting chemotaxis protein  70.99 
 
 
776 aa  681    Burkholderia mallei NCTC 10229  Bacteria  normal  0.562276  n/a   
 
 
-
 
NC_010515  Bcenmc03_5980  methyl-accepting chemotaxis sensory transducer with Cache sensor  93.99 
 
 
599 aa  1087    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2718  methyl-accepting chemotaxis sensory transducer with Cache sensor  74.41 
 
 
599 aa  842    Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A1452  methyl-accepting chemotaxis protein  63.88 
 
 
595 aa  729    Yersinia pestis Angola  Bacteria  normal  0.19796  normal  0.220045 
 
 
-
 
NC_006348  BMA2894  methyl-accepting chemotaxis protein, putative  71.21 
 
 
605 aa  822    Burkholderia mallei ATCC 23344  Bacteria  normal  0.955347  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3471  putative methyl-accepting chemotaxis protein  71.38 
 
 
605 aa  824    Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  58.17 
 
 
601 aa  661    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0036  methyl-accepting chemotaxis sensory transducer  68.56 
 
 
599 aa  782    Ralstonia eutropha JMP134  Bacteria  normal  0.226397  n/a   
 
 
-
 
NC_007434  BURPS1710b_0112  putative methyl-accepting chemotaxis protein  70.88 
 
 
605 aa  812    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3894  methyl-accepting chemotaxis protein  70.72 
 
 
601 aa  812    Burkholderia pseudomallei 668  Bacteria  normal  0.0518753  n/a   
 
 
-
 
NC_007511  Bcep18194_B1642  methyl-accepting chemotaxis sensory transducer  94.49 
 
 
599 aa  1091    Burkholderia sp. 383  Bacteria  normal  normal  0.255489 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.77 
 
 
608 aa  709    Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I3209  methyl-accepting chemotaxis protein, putative  70.38 
 
 
601 aa  815    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2920  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.93 
 
 
596 aa  712    Dickeya dadantii Ech703  Bacteria  normal  0.115472  n/a   
 
 
-
 
NC_010552  BamMC406_4256  methyl-accepting chemotaxis sensory transducer with Cache sensor  100 
 
 
599 aa  1192    Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.844754 
 
 
-
 
NC_013421  Pecwa_3307  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.26 
 
 
596 aa  681    Pectobacterium wasabiae WPP163  Bacteria  normal  0.298951  n/a   
 
 
-
 
NC_012917  PC1_1003  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.6 
 
 
596 aa  685    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  92.15 
 
 
599 aa  1062    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1405  methyl-accepting chemotaxis sensory transducer  74.58 
 
 
599 aa  847    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.44 
 
 
609 aa  705    Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_2833  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.88 
 
 
595 aa  729    Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3992  methyl-accepting chemotaxis sensory transducer  93.82 
 
 
599 aa  1088    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3790  methyl-accepting chemotaxis sensory transducer  99.5 
 
 
599 aa  1185    Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.178746 
 
 
-
 
NC_009708  YpsIP31758_2753  methyl-accepting chemotaxis protein  63.71 
 
 
595 aa  726    Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0257893  n/a   
 
 
-
 
NC_008543  Bcen2424_4375  methyl-accepting chemotaxis sensory transducer  93.82 
 
 
599 aa  1088    Burkholderia cenocepacia HI2424  Bacteria  normal  0.480091  normal 
 
 
-
 
NC_012912  Dd1591_3111  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.93 
 
 
596 aa  712    Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1874  methyl-accepting chemotaxis sensory transducer  60.6 
 
 
597 aa  671    Acidovorax citrulli AAC00-1  Bacteria  normal  0.0423277  normal 
 
 
-
 
NC_009436  Ent638_2328  methyl-accepting chemotaxis sensory transducer  56.17 
 
 
594 aa  615  1e-175  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C6641  methyl-accepting chemotaxis sensory transducer  52.33 
 
 
609 aa  594  1e-168  Burkholderia sp. 383  Bacteria  normal  normal  0.0855945 
 
 
-
 
NC_010512  Bcenmc03_6304  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.08 
 
 
605 aa  589  1e-167  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.598133  normal 
 
 
-
 
NC_008544  Bcen2424_6698  methyl-accepting chemotaxis sensory transducer  53.08 
 
 
605 aa  590  1e-167  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0770827  normal  0.965565 
 
 
-
 
NC_003295  RSc3307  putative methyl-accepting chemotaxis transmembrane protein  51.76 
 
 
646 aa  570  1e-161  Ralstonia solanacearum GMI1000  Bacteria  normal  0.154231  normal 
 
 
-
 
NC_010551  BamMC406_1273  methyl-accepting chemotaxis sensory transducer  52.58 
 
 
609 aa  562  1.0000000000000001e-159  Burkholderia ambifaria MC40-6  Bacteria  normal  0.258977  normal  0.0501221 
 
 
-
 
NC_010682  Rpic_3501  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.67 
 
 
600 aa  560  1e-158  Ralstonia pickettii 12J  Bacteria  normal  normal  0.112529 
 
 
-
 
NC_008390  Bamb_1247  methyl-accepting chemotaxis sensory transducer  52.58 
 
 
609 aa  561  1e-158  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_6463  methyl-accepting chemotaxis sensory transducer  52.53 
 
 
654 aa  557  1e-157  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_3176  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.33 
 
 
600 aa  551  1e-155  Ralstonia pickettii 12D  Bacteria  normal  0.0503971  normal 
 
 
-
 
NC_007348  Reut_B5136  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  49.5 
 
 
599 aa  533  1e-150  Ralstonia eutropha JMP134  Bacteria  normal  0.481543  n/a   
 
 
-
 
NC_008752  Aave_1100  methyl-accepting chemotaxis sensory transducer  50 
 
 
611 aa  532  1e-150  Acidovorax citrulli AAC00-1  Bacteria  normal  0.127748  normal 
 
 
-
 
NC_010002  Daci_0582  methyl-accepting chemotaxis sensory transducer  49.83 
 
 
610 aa  525  1e-147  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  49.67 
 
 
617 aa  523  1e-147  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  47.75 
 
 
618 aa  505  9.999999999999999e-143  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_010002  Daci_3477  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.49 
 
 
606 aa  503  1e-141  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3786  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.57 
 
 
610 aa  504  1e-141  Delftia acidovorans SPH-1  Bacteria  normal  0.0254049  normal  0.3858 
 
 
-
 
NC_007963  Csal_0126  methyl-accepting chemotaxis sensory transducer  46.01 
 
 
613 aa  501  1e-140  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  46.33 
 
 
632 aa  498  1e-139  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1081  methyl-accepting chemotaxis sensory transducer  41.85 
 
 
629 aa  319  7e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1099  methyl-accepting chemotaxis sensory transducer  35.6 
 
 
699 aa  318  1e-85  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_5569  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.38 
 
 
630 aa  318  2e-85  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  52.8 
 
 
584 aa  302  1e-80  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0036  methyl-accepting chemotaxis sensory transducer  56.48 
 
 
567 aa  301  3e-80  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3785  methyl-accepting chemotaxis sensory transducer  42.51 
 
 
620 aa  298  2e-79  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0060774  normal  0.0147123 
 
 
-
 
NC_007953  Bxe_C1139  methyl-accepting chemotaxis sensory transducer, Cache sensor  40.16 
 
 
630 aa  296  5e-79  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.584827 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  49.47 
 
 
542 aa  295  2e-78  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3736  methyl-accepting chemotaxis sensory transducer  41.93 
 
 
620 aa  293  5e-78  Burkholderia cenocepacia HI2424  Bacteria  normal  0.455432  normal  0.0212994 
 
 
-
 
NC_013421  Pecwa_2372  methyl-accepting chemotaxis sensory transducer  37.02 
 
 
657 aa  293  6e-78  Pectobacterium wasabiae WPP163  Bacteria  normal  0.63052  n/a   
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  51.47 
 
 
602 aa  293  6e-78  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_008061  Bcen_4628  methyl-accepting chemotaxis sensory transducer  41.93 
 
 
620 aa  293  6e-78  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0035  methyl-accepting chemotaxis sensory transducer  53.05 
 
 
558 aa  292  1e-77  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  52.78 
 
 
569 aa  291  2e-77  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C1067  methyl-accepting chemotaxis sensory transducer  44.71 
 
 
634 aa  289  1e-76  Burkholderia xenovorans LB400  Bacteria  normal  0.318926  normal 
 
 
-
 
NC_010002  Daci_5410  methyl-accepting chemotaxis sensory transducer  56.53 
 
 
635 aa  288  2e-76  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  57.24 
 
 
548 aa  286  5e-76  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  54.85 
 
 
547 aa  285  1.0000000000000001e-75  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  49.08 
 
 
543 aa  285  2.0000000000000002e-75  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4997  methyl-accepting chemotaxis sensory transducer  41.08 
 
 
620 aa  285  2.0000000000000002e-75  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.245568 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  54.85 
 
 
547 aa  285  2.0000000000000002e-75  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  57.6 
 
 
843 aa  285  2.0000000000000002e-75  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  57.04 
 
 
554 aa  285  2.0000000000000002e-75  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  54.85 
 
 
547 aa  285  2.0000000000000002e-75  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  54.85 
 
 
547 aa  285  2.0000000000000002e-75  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0007  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.94 
 
 
636 aa  284  3.0000000000000004e-75  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  31.59 
 
 
629 aa  284  3.0000000000000004e-75  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  56.89 
 
 
797 aa  284  3.0000000000000004e-75  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
554 aa  284  3.0000000000000004e-75  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2086  methyl-accepting chemotaxis sensory transducer  38.48 
 
 
657 aa  284  3.0000000000000004e-75  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  57.24 
 
 
536 aa  284  3.0000000000000004e-75  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  54.85 
 
 
547 aa  284  4.0000000000000003e-75  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  50.15 
 
 
554 aa  284  4.0000000000000003e-75  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  56.34 
 
 
583 aa  283  4.0000000000000003e-75  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_013421  Pecwa_0006  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.8 
 
 
667 aa  284  4.0000000000000003e-75  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  55.63 
 
 
733 aa  284  4.0000000000000003e-75  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3618  methyl-accepting chemotaxis sensory transducer  41.65 
 
 
620 aa  283  5.000000000000001e-75  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0344374  normal 
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  50.71 
 
 
674 aa  283  5.000000000000001e-75  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  54.07 
 
 
755 aa  283  5.000000000000001e-75  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  52.4 
 
 
559 aa  283  5.000000000000001e-75  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  52.74 
 
 
594 aa  283  5.000000000000001e-75  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  57.34 
 
 
532 aa  283  5.000000000000001e-75  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  50.71 
 
 
674 aa  283  5.000000000000001e-75  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  56.94 
 
 
740 aa  283  6.000000000000001e-75  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1423  methyl-accepting chemotaxis sensory transducer  45.56 
 
 
584 aa  283  9e-75  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0020  methyl-accepting chemotaxis sensory transducer  55.22 
 
 
550 aa  282  1e-74  Acidovorax sp. JS42  Bacteria  normal  normal  0.857372 
 
 
-
 
NC_011992  Dtpsy_0038  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
550 aa  282  1e-74  Acidovorax ebreus TPSY  Bacteria  normal  0.398829  n/a   
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  50.94 
 
 
767 aa  281  2e-74  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_5471  methyl-accepting chemotaxis sensory transducer  53.95 
 
 
620 aa  281  2e-74  Burkholderia ambifaria AMMD  Bacteria  normal  0.407039  normal 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  48.83 
 
 
550 aa  281  3e-74  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  33.13 
 
 
627 aa  281  3e-74  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  54.85 
 
 
745 aa  280  4e-74  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
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